SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4ejr'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VL2_A_BEZA1162_0
(PEROXIREDOXIN-5)
4ejr MAJOR CAPSID PROTEIN
VP60

(Rabbit
hemorrhagic
disease
virus)
5 / 10 PRO A  97
THR A 103
PHE A 221
THR A 181
GLY A 112
None
1.43A 2vl2A-4ejrA:
undetectable
2vl2C-4ejrA:
undetectable
2vl2A-4ejrA:
24.11
2vl2C-4ejrA:
24.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WEK_B_DIFB1373_1
(ZINC-BINDING ALCOHOL
DEHYDROGENASE
DOMAIN-CONTAINING
PROTEIN 2)
4ejr MAJOR CAPSID PROTEIN
VP60

(Rabbit
hemorrhagic
disease
virus)
4 / 8 ASN A  99
VAL A  93
TYR A  74
PHE A  78
None
1.18A 2wekB-4ejrA:
undetectable
2wekB-4ejrA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R9V_B_DXCB323_0
(INVASIN IPAD)
4ejr MAJOR CAPSID PROTEIN
VP60

(Rabbit
hemorrhagic
disease
virus)
4 / 7 LEU A 173
ILE A 142
ILE A 144
VAL A 150
None
0.51A 3r9vA-4ejrA:
undetectable
3r9vB-4ejrA:
undetectable
3r9vA-4ejrA:
21.54
3r9vB-4ejrA:
21.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CSY_B_ACRB601_2
(4-ALPHA-GLUCANOTRANS
FERASE DPE1,
CHLOROPLASTIC/AMYLOP
LASTIC)
4ejr MAJOR CAPSID PROTEIN
VP60

(Rabbit
hemorrhagic
disease
virus)
4 / 5 TYR A  73
PHE A 221
LEU A 106
PRO A 217
None
1.40A 5csyB-4ejrA:
undetectable
5csyB-4ejrA:
19.46