SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4ekd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_E_TFPE212_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
4 / 7 PHE A 272
LEU A 196
MET A 227
SER A 225
None
0.99A 1wrlE-4ekdA:
undetectable
1wrlE-4ekdA:
14.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YAJ_K_BEZK4387_0
(CES1 PROTEIN)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
3 / 3 TRP A 263
LEU A  43
LYS A  41
None
1.40A 1yajK-4ekdA:
2.6
1yajK-4ekdA:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2KUH_A_HLTA150_1
(CALMODULIN)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
4 / 6 LEU A  42
MET A 227
LEU A  44
MET A 203
None
1.24A 2kuhA-4ekdA:
undetectable
2kuhA-4ekdA:
10.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VDY_B_HCYB1384_1
(CORTICOSTEROID-BINDI
NG GLOBULIN)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
5 / 12 VAL A 199
ILE A 348
ASN A 352
SER A 268
PHE A 201
None
1.42A 2vdyB-4ekdA:
undetectable
2vdyB-4ekdA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TYE_B_YTZB902_1
(DIHYDROPTEROATE
SYNTHASE)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
3 / 3 PHE A 292
LYS A 252
SER A 251
None
1.32A 3tyeB-4ekdA:
2.3
3tyeB-4ekdA:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L3G_F_ACTF401_0
(METHYLAMINE
DEHYDROGENASE HEAVY
CHAIN)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
3 / 3 ARG A  38
LEU A  40
GLU A  39
None
0.67A 4l3gF-4ekdA:
undetectable
4l3gF-4ekdA:
20.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N48_B_SAMB601_1
(CAP-SPECIFIC MRNA
(NUCLEOSIDE-2'-O-)-M
ETHYLTRANSFERASE 1)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
4 / 5 ASN A 274
GLY A  51
ASP A 163
ASP A 155
GDP  A 401 (-3.5A)
GDP  A 401 (-3.2A)
None
GDP  A 401 ( 4.8A)
1.10A 4n48B-4ekdA:
undetectable
4n48B-4ekdA:
23.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N49_A_SAMA601_1
(CAP-SPECIFIC MRNA
(NUCLEOSIDE-2'-O-)-M
ETHYLTRANSFERASE 1)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
4 / 4 ASN A 274
GLY A  51
ASP A 163
ASP A 155
GDP  A 401 (-3.5A)
GDP  A 401 (-3.2A)
None
GDP  A 401 ( 4.8A)
1.09A 4n49A-4ekdA:
undetectable
4n49A-4ekdA:
23.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UCK_A_SAMA2409_0
(RNA-DIRECTED RNA
POLYMERASE L)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
6 / 12 GLY A  51
GLY A  48
GLY A 208
SER A  50
ALA A 331
THR A 332
GDP  A 401 (-3.2A)
ALF  A 402 (-2.9A)
ALF  A 402 (-3.1A)
GDP  A 401 (-3.9A)
GDP  A 401 (-3.2A)
GDP  A 401 (-3.6A)
1.41A 4uckA-4ekdA:
undetectable
4uckA-4ekdA:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X5F_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
5 / 12 ILE A 217
PHE A 220
THR A 257
ILE A 258
LEU A  45
None
1.08A 4x5fA-4ekdA:
undetectable
4x5fA-4ekdA:
16.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X5F_B_FOLB201_0
(DIHYDROFOLATE
REDUCTASE)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
5 / 12 ILE A 217
PHE A 220
THR A 257
ILE A 258
LEU A  45
None
1.10A 4x5fB-4ekdA:
undetectable
4x5fB-4ekdA:
16.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6F6S_B_CXQB705_1
(ENVELOPE
GLYCOPROTEIN,ENVELOP
E GLYCOPROTEIN,GP1
ENVELOPE
GLYCOPROTEIN)
4ekd GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(Q) SUBUNIT
ALPHA

(Mus
musculus)
4 / 6 VAL A 199
LEU A  40
LEU A  42
LEU A 351
None
0.90A 6f6sA-4ekdA:
undetectable
6f6sB-4ekdA:
undetectable
6f6sA-4ekdA:
12.20
6f6sB-4ekdA:
13.13