SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4f88'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BU5_B_RBFB302_1
(PROTEIN (FLAVODOXIN))		 4f88 PLYCA
(Streptococcus
virus
C1) 		4 / 8 ASN 1 228
ASP 1 284
GLY 1 362
ASP 1 363
 None
 0.79A 1bu5B-4f881:
undetectable		 1bu5B-4f881:
17.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IB0_A_DIFA701_1
(LACTOTRANSFERRIN)		 4f88 PLYCA
(Streptococcus
virus
C1) 		4 / 4 PRO 1 117
TYR 1 115
GLY 1 215
THR 1 216
 None
 1.18A 3ib0A-4f881:
undetectable		 3ib0A-4f881:
21.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVN_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)		 4f88 PLYCA
(Streptococcus
virus
C1) 		5 / 11 THR 1 220
GLN 1 417
CYH 1 333
GLY 1 364
ALA 1 367
 None
 1.45A 4qvnH-4f881:
undetectable
4qvnI-4f881:
undetectable		 4qvnH-4f881:
20.04
4qvnI-4f881:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVQ_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)		 4f88 PLYCA
(Streptococcus
virus
C1) 		5 / 11 THR 1 220
GLN 1 417
CYH 1 333
GLY 1 364
ALA 1 367
 None
 1.45A 4qvqH-4f881:
undetectable
4qvqI-4f881:
undetectable		 4qvqH-4f881:
20.04
4qvqI-4f881:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVQ_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)		 4f88 PLYCA
(Streptococcus
virus
C1) 		5 / 11 THR 1 220
GLN 1 417
CYH 1 333
GLY 1 364
ALA 1 367
 None
 1.45A 4qvqV-4f881:
undetectable
4qvqW-4f881:
undetectable		 4qvqV-4f881:
20.04
4qvqW-4f881:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QWU_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)		 4f88 PLYCA
(Streptococcus
virus
C1) 		5 / 11 THR 1 220
GLN 1 417
CYH 1 333
GLY 1 364
ALA 1 367
 None
 1.44A 4qwuH-4f881:
undetectable
4qwuI-4f881:
undetectable		 4qwuH-4f881:
20.04
4qwuI-4f881:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QWU_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)		 4f88 PLYCA
(Streptococcus
virus
C1) 		5 / 11 THR 1 220
GLN 1 417
CYH 1 333
GLY 1 364
ALA 1 367
 None
 1.44A 4qwuV-4f881:
undetectable
4qwuW-4f881:
undetectable		 4qwuV-4f881:
20.04
4qwuW-4f881:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LRB_A_ACRA1003_1
(ALPHA-1,4 GLUCAN
PHOSPHORYLASE)		 4f88 PLYCA
(Streptococcus
virus
C1) 		4 / 6 GLU 1 113
PHE 1 413
THR 1 415
TYR 1 414
 None
 1.41A 5lrbA-4f881:
undetectable		 5lrbA-4f881:
19.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LSU_B_SAMB1304_1
(HISTONE-LYSINE
N-METHYLTRANSFERASE
NSD2)		 4f88 PLYCA
(Streptococcus
virus
C1) 		3 / 3 ASN 1 366
TYR 1 334
CYH 1 404
 None
 0.80A 5lsuB-4f881:
undetectable		 5lsuB-4f881:
17.38