SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4fd2'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ICV_B_NIOB702_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
4 / 5 PHE A 666
SER A 662
THR A 702
PHE A 699
None
1.27A 1icvA-4fd2A:
undetectable
1icvB-4fd2A:
undetectable
1icvA-4fd2A:
21.99
1icvB-4fd2A:
21.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A3B_B_CFFB2434_1
(CHITINASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
4 / 6 GLU A 565
TYR A 725
ASP A 572
ARG A 575
None
1.34A 2a3bB-4fd2A:
undetectable
2a3bB-4fd2A:
22.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DAU_A_MTXA201_1
(DIHYDROFOLATE
REDUCTASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
5 / 12 ILE A 704
MET A 624
ALA A 655
ILE A 679
LEU A 689
None
1.12A 3dauA-4fd2A:
undetectable
3dauA-4fd2A:
16.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OXC_A_ROCA401_2
(PROTEASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
3 / 3 ARG A 578
LEU A 549
THR A 611
None
0.87A 3oxcA-4fd2A:
undetectable
3oxcA-4fd2A:
18.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3M_A_DLUA398_1
(PFV INTEGRASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
4 / 8 ASP A 691
GLY A 694
GLN A 651
GLU A 654
None
0.85A 3s3mA-4fd2A:
undetectable
3s3mA-4fd2A:
20.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3N_A_DLUA398_1
(PFV INTEGRASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
4 / 8 ASP A 691
GLY A 694
GLN A 651
GLU A 654
None
0.81A 3s3nA-4fd2A:
undetectable
3s3nA-4fd2A:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EJG_A_NCTA501_1
(CYTOCHROME P450 2A13)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
4 / 7 PHE A 740
PHE A 744
ALA A 672
LEU A 706
None
1.04A 4ejgA-4fd2A:
undetectable
4ejgA-4fd2A:
22.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JX1_B_CAMB502_0
(CAMPHOR
5-MONOOXYGENASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
5 / 10 PHE A 593
LEU A 556
VAL A 663
ILE A 705
VAL A 703
None
1.16A 4jx1B-4fd2A:
undetectable
4jx1B-4fd2A:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PD9_A_ADNA501_2
(NUPC FAMILY PROTEIN)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
3 / 3 THR A 653
ASN A 678
PHE A 677
None
0.79A 4pd9A-4fd2A:
undetectable
4pd9A-4fd2A:
21.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YO9_B_ACTB401_0
(3C-LIKE PROTEINASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
3 / 3 ARG A 695
ASP A 691
TYR A 646
None
0.94A 4yo9B-4fd2A:
undetectable
4yo9B-4fd2A:
21.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5G48_B_1FLB1375_1
(DNA POLYMERASE III
SUBUNIT BETA)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
5 / 9 LEU A 556
THR A 611
THR A 607
LEU A 612
MET A 619
None
1.48A 5g48B-4fd2A:
undetectable
5g48B-4fd2A:
22.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GS4_A_ESTA603_2
(ESTROGEN RECEPTOR)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
4 / 6 LEU A 745
LEU A 684
LEU A 681
LEU A 706
None
0.95A 5gs4A-4fd2A:
undetectable
5gs4A-4fd2A:
22.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X66_A_MTXA402_1
(THYMIDYLATE SYNTHASE)
4fd2 CHAPERONE PROTEIN
CLPB

(Thermus
thermophilus)
5 / 12 PHE A 733
ILE A 751
LEU A 710
GLY A 711
ALA A 668
None
0.96A 5x66A-4fd2A:
undetectable
5x66B-4fd2A:
undetectable
5x66A-4fd2A:
20.92
5x66B-4fd2A:
20.92