SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4is8'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1S9P_B_DESB459_1
(ESTROGEN-RELATED
RECEPTOR GAMMA)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
5 / 12 CYH A 346
ALA A 349
LEU A 386
ARG A 393
LEU A 427
None
0.88A 1s9pB-4is8A:
23.3
1s9pB-4is8A:
32.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVD_B_SAMB601_1
(CATECHOL-O-METHYLTRA
NSFERASE)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
3 / 3 SER A 362
GLU A 312
ASP A 389
None
0.78A 2avdB-4is8A:
undetectable
2avdB-4is8A:
21.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3APW_B_DP0B190_1
(ALPHA-1-ACID
GLYCOPROTEIN 2)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
5 / 12 VAL A 318
ILE A 322
LEU A 531
GLN A 351
ALA A 360
None
1.14A 3apwB-4is8A:
undetectable
3apwB-4is8A:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U52_A_CUA515_0
(PHENOL HYDROXYLASE
COMPONENT PHL
PHENOL HYDROXYLASE
COMPONENT PHN)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
3 / 3 HIS A 537
HIS A 521
ILE A 533
None
0.85A 3u52A-4is8A:
undetectable
3u52C-4is8A:
undetectable
3u52A-4is8A:
15.86
3u52C-4is8A:
22.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_A_ACTA502_0
(RNA-DEPENDENT RNA
POLYMERASE)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
4 / 5 LYS A 370
LEU A 369
GLU A 368
LEU A 469
None
1.35A 4k4yA-4is8A:
0.7
4k4yA-4is8A:
18.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_E_ACTE503_0
(RNA-DEPENDENT RNA
POLYMERASE)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
4 / 4 LYS A 370
LEU A 369
GLU A 368
LEU A 469
None
1.37A 4k4yE-4is8A:
undetectable
4k4yE-4is8A:
18.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_I_ACTI503_0
(RNA-DEPENDENT RNA
POLYMERASE)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
4 / 5 LYS A 370
LEU A 369
GLU A 368
LEU A 469
None
1.35A 4k4yI-4is8A:
undetectable
4k4yI-4is8A:
18.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5I1N_G_DVAG9_0
(D-VILLIN HEADPIECE
SUBDOMAIN
VILLIN-1)
4is8 NUCLEAR RECEPTOR
SUBFAMILY 5 GROUP A
MEMBER 2

(Homo
sapiens)
3 / 3 ALA A 423
ASN A 426
LEU A 427
None
0.32A 5i1nB-4is8A:
undetectable
5i1nB-4is8A:
9.61