SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4jb1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YAJ_G_BEZG3385_0
(CES1 PROTEIN)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
3 / 3 SER A 142
VAL A  79
LEU A  87
None
0.34A 1yajG-4jb1A:
undetectable
1yajG-4jb1A:
21.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QQT_A_AINA596_1
(LACTOPEROXIDASE)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
4 / 6 ARG A 314
PHE A 240
GLN A 321
PRO A 334
None
None
GOL  A 408 (-2.7A)
GOL  A 408 (-3.9A)
1.17A 2qqtA-4jb1A:
undetectable
2qqtA-4jb1A:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELW_A_SAMA4633_0
(METHYLTRANSFERASE)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 GLY A 122
GLY A  93
GLY A  75
THR A 120
ILE A 179
FAD  A 401 ( 4.0A)
None
None
FAD  A 401 (-2.8A)
FAD  A 401 (-3.9A)
0.96A 3elwA-4jb1A:
undetectable
3elwA-4jb1A:
20.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FL9_E_TOPE200_1
(DIHYDROFOLATE
REDUCTASE (DHFR))
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 10 ALA A 109
GLU A 190
LEU A 192
ILE A 220
THR A 187
None
GOL  A 405 (-3.0A)
None
None
GOL  A 405 ( 4.1A)
1.12A 3fl9E-4jb1A:
undetectable
3fl9E-4jb1A:
18.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GCL_A_AINA609_1
(LACTOPEROXIDASE)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
4 / 6 ARG A 314
PHE A 240
GLN A 321
PRO A 334
None
None
GOL  A 408 (-2.7A)
GOL  A 408 (-3.9A)
1.16A 3gclA-4jb1A:
undetectable
3gclA-4jb1A:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LN1_A_CELA682_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 TYR A 165
LEU A 245
ALA A 131
GLY A 276
ALA A 275
None
None
NAP  A 402 ( 3.3A)
None
None
1.04A 3ln1A-4jb1A:
undetectable
3ln1A-4jb1A:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LN1_B_CELB682_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 TYR A 165
LEU A 245
ALA A 131
GLY A 276
ALA A 275
None
None
NAP  A 402 ( 3.3A)
None
None
1.04A 3ln1B-4jb1A:
undetectable
3ln1B-4jb1A:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LN1_C_CELC682_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 TYR A 165
LEU A 245
ALA A 131
GLY A 276
ALA A 275
None
None
NAP  A 402 ( 3.3A)
None
None
1.04A 3ln1C-4jb1A:
undetectable
3ln1C-4jb1A:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LN1_D_CELD682_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 TYR A 165
LEU A 245
ALA A 131
GLY A 276
ALA A 275
None
None
NAP  A 402 ( 3.3A)
None
None
1.03A 3ln1D-4jb1A:
undetectable
3ln1D-4jb1A:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQT_A_30ZA1920_1
(ANDROGEN RECEPTOR)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
4 / 6 PRO A 231
GLY A 235
ASN A 304
ASN A  15
FAD  A 401 ( 4.7A)
None
None
None
0.91A 3zqtA-4jb1A:
undetectable
3zqtA-4jb1A:
19.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ECK_A_FOLA703_0
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 VAL A 121
ALA A  95
PHE A  99
LEU A 186
VAL A  86
None
1.07A 4eckA-4jb1A:
undetectable
4eckA-4jb1A:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YV5_A_SVRA205_2
(BASIC PHOSPHOLIPASE
A2 HOMOLOG 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
4 / 6 PHE A 328
LEU A 332
ASN A 243
PRO A 244
None
None
NAP  A 402 (-2.8A)
None
1.14A 4yv5B-4jb1A:
undetectable
4yv5B-4jb1A:
14.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YV5_B_SVRB207_1
(BASIC PHOSPHOLIPASE
A2 HOMOLOG 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
4 / 6 PHE A 328
LEU A 332
ASN A 243
PRO A 244
None
None
NAP  A 402 (-2.8A)
None
1.16A 4yv5A-4jb1A:
undetectable
4yv5A-4jb1A:
14.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JW1_A_CELA602_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 TYR A 165
LEU A 245
ALA A 131
GLY A 276
ALA A 275
None
None
NAP  A 402 ( 3.3A)
None
None
1.00A 5jw1A-4jb1A:
undetectable
5jw1A-4jb1A:
19.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JW1_B_CELB602_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4jb1 UDP-N-ACETYLENOLPYRU
VOYLGLUCOSAMINE
REDUCTASE

(Pseudomonas
aeruginosa)
5 / 12 TYR A 165
LEU A 245
ALA A 131
GLY A 276
ALA A 275
None
None
NAP  A 402 ( 3.3A)
None
None
0.98A 5jw1B-4jb1A:
undetectable
5jw1B-4jb1A:
19.96