SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4kbx'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1B02_A_C2FA281_0
(PROTEIN (THYMIDYLATE
SYNTHASE))		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		5 / 11 THR A 357
ILE A 354
LEU A 363
GLY A 382
ALA A  70
 None
 1.01A 1b02A-4kbxA:
undetectable		 1b02A-4kbxA:
20.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I9G_A_SAMA301_0
(HYPOTHETICAL PROTEIN
RV2118C)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		5 / 12 GLY A 261
SER A 238
ALA A 236
GLN A  37
ASP A  34
 None
None
LLP  A  61 ( 4.8A)
None
None
 1.28A 1i9gA-4kbxA:
undetectable		 1i9gA-4kbxA:
22.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QE6_B_SAMB400_1
(UNCHARACTERIZED
PROTEIN TFU_2867)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		3 / 3 ASN A  41
ARG A  44
ASP A 270
 None
 0.81A 2qe6B-4kbxA:
undetectable		 2qe6B-4kbxA:
22.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_C_DVAC8_0
(GRAMICIDIN A)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		3 / 3 VAL A 362
TRP A 279
TRP A  31
 None
 1.29A 2xdcC-4kbxA:
undetectable
2xdcD-4kbxA:
undetectable		 2xdcC-4kbxA:
4.29
2xdcD-4kbxA:
4.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3H5G_B_LEIB16_0
(COIL SER L16D-PEN)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 5 LEU A  45
GLN A  37
LEU A 259
GLU A 273
 None
 1.12A 3h5gA-4kbxA:
undetectable
3h5gB-4kbxA:
undetectable		 3h5gA-4kbxA:
5.93
3h5gB-4kbxA:
5.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LXE_A_TORA262_1
(CARBONIC ANHYDRASE 1)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		5 / 12 SER A 165
HIS A 104
LEU A 190
THR A 191
HIS A 192
 None
LLP  A  61 ( 4.5A)
None
None
None
 1.30A 3lxeA-4kbxA:
undetectable		 3lxeA-4kbxA:
21.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LXE_B_TORB262_1
(CARBONIC ANHYDRASE 1)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		5 / 12 SER A 165
HIS A 104
LEU A 190
THR A 191
HIS A 192
 None
LLP  A  61 ( 4.5A)
None
None
None
 1.29A 3lxeB-4kbxA:
undetectable		 3lxeB-4kbxA:
21.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUE_D_SUED1201_2
(NS3 PROTEASE, NS4A
PROTEIN)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		3 / 3 TYR A  86
LEU A 150
LYS A 151
 None
 0.60A 3sueD-4kbxA:
0.9		 3sueD-4kbxA:
22.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TJ7_A_ACTA609_0
(GBAA_1210 PROTEIN)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		3 / 3 LYS A   1
VAL A   3
HIS A 306
 ACE  A   0 ( 3.0A)
ACE  A   0 ( 3.9A)
ACE  A   0 ( 4.0A)
 1.23A 3tj7A-4kbxA:
undetectable		 3tj7A-4kbxA:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WRI_A_CAMA502_0
(CAMPHOR
5-MONOOXYGENASE)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 5 LEU A 259
GLY A 256
ILE A  81
VAL A  82
 None
LLP  A  61 ( 3.4A)
None
None
 0.84A 3wriA-4kbxA:
undetectable		 3wriA-4kbxA:
21.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WRI_B_CAMB502_0
(CAMPHOR
5-MONOOXYGENASE)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 5 LEU A 259
GLY A 256
ILE A  81
VAL A  82
 None
LLP  A  61 ( 3.4A)
None
None
 0.84A 3wriB-4kbxA:
undetectable		 3wriB-4kbxA:
21.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_A_DVAA8_0
(VAL-GRAMICIDIN A)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		3 / 3 VAL A 362
TRP A 279
TRP A  31
 None
 1.36A 3zq8A-4kbxA:
undetectable
3zq8B-4kbxA:
undetectable		 3zq8A-4kbxA:
4.29
3zq8B-4kbxA:
4.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C9L_B_CAMB1419_0
(CYTOCHROME P450)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		5 / 12 THR A 125
LEU A 190
GLY A 189
ILE A 175
VAL A 176
 None
 1.05A 4c9lB-4kbxA:
undetectable		 4c9lB-4kbxA:
23.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F4D_A_CHDA506_0
(FERROCHELATASE,
MITOCHONDRIAL)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 4 PRO A 207
LEU A 211
ILE A 215
ARG A 218
 None
 1.29A 4f4dA-4kbxA:
undetectable		 4f4dA-4kbxA:
22.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F5Z_A_BEZA302_0
(HALOALKANE
DEHALOGENASE)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 8 PHE A 355
VAL A 356
LEU A 105
TYR A 299
 LLP  A  61 ( 4.0A)
None
LLP  A  61 ( 3.8A)
SO4  A 401 (-4.7A)
 1.19A 4f5zA-4kbxA:
undetectable		 4f5zA-4kbxA:
21.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4TXN_A_URFA302_1
(URIDINE
PHOSPHORYLASE)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		5 / 7 GLY A 256
GLN A 353
ARG A 351
ALA A 258
ILE A 263
 LLP  A  61 ( 3.4A)
LLP  A  61 (-3.7A)
LLP  A  61 (-3.3A)
None
None
 1.49A 4txnA-4kbxA:
undetectable		 4txnA-4kbxA:
22.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4W5N_A_IPHA902_0
(PROTEIN ARGONAUTE-2)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 6 LEU A 259
ILE A  38
LEU A  73
TYR A  78
 None
 0.86A 4w5nA-4kbxA:
undetectable		 4w5nA-4kbxA:
19.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JMN_B_FUAB1101_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 5 ILE A 317
LEU A 336
HIS A 306
VAL A   3
 LLP  A   7 (-3.5A)
None
ACE  A   0 ( 4.0A)
ACE  A   0 ( 3.9A)
 1.15A 5jmnB-4kbxA:
undetectable		 5jmnB-4kbxA:
17.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DWD_C_GLYC713_0
(DEOXYNUCLEOSIDE
TRIPHOSPHATE
TRIPHOSPHOHYDROLASE
SAMHD1)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		3 / 3 GLN A 230
TYR A  57
ASN A 232
 None
 1.06A 6dwdC-4kbxA:
undetectable		 6dwdC-4kbxA:
20.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EW0_G_TA1G501_2
(TUBULIN BETA CHAIN)		 4kbx UNCHARACTERIZED
PROTEIN YHFX
(Escherichia
coli) 		4 / 6 LEU A  45
LEU A  58
THR A 260
ARG A  65
 None
 1.05A 6ew0G-4kbxA:
undetectable		 6ew0G-4kbxA:
13.85