SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4ksd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GWU_A_SREA801_1
(TRANSPORTER)		 4ksd R2 PROTEIN
(Lama
glama) 		5 / 12 LEU B 100
LEU B 102
ARG B  99
TYR B 107
THR B  50
 None
 1.23A 3gwuA-4ksdB:
undetectable		 3gwuA-4ksdB:
10.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QN9_B_DXCB610_0
(N-ACYL-PHOSPHATIDYLE
THANOLAMINE-HYDROLYZ
ING PHOSPHOLIPASE D)		 4ksd R2 PROTEIN
(Lama
glama) 		3 / 3 GLY B  42
PRO B  41
ALA B  92
 None
 0.51A 4qn9B-4ksdB:
undetectable		 4qn9B-4ksdB:
15.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ECM_D_LEUD602_0
(JASMONIC ACID-AMIDO
SYNTHETASE JAR1)		 4ksd R2 PROTEIN
(Lama
glama) 		4 / 7 ALA B  92
THR B  91
VAL B 114
GLU B  89
 None
 0.75A 5ecmD-4ksdB:
undetectable		 5ecmD-4ksdB:
12.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z86_J_CHDJ101_0
(CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 4ksd R2 PROTEIN
(Lama
glama) 		4 / 5 ARG B  19
MET B  83
THR B  84
LEU B  86
 None
 1.42A 5z86J-4ksdB:
undetectable		 5z86J-4ksdB:
21.77