SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4l5h'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7H_C_SAMC530_1
(TYPE I RESTRICTION
ENZYME ECOKI M
PROTEIN)
4l5h VVTL1
(Vitis
vinifera)
3 / 3 TYR A 197
GLU A 107
ASN A  65
None
0.72A 2y7hC-4l5hA:
undetectable
2y7hC-4l5hA:
16.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DDY_A_RBFA187_1
(LUMAZINE PROTEIN)
4l5h VVTL1
(Vitis
vinifera)
5 / 12 SER A 134
THR A 219
ILE A  68
ALA A 106
ILE A 119
None
1.05A 3ddyA-4l5hA:
undetectable
3ddyA-4l5hA:
19.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4B53_B_ACTB1445_0
(IG GAMMA-4 CHAIN C
REGION)
4l5h VVTL1
(Vitis
vinifera)
3 / 3 GLU A  85
GLY A 157
SER A  73
None
0.59A 4b53B-4l5hA:
undetectable
4b53B-4l5hA:
18.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5L5F_Y_BO2Y301_1
(PROTEASOME SUBUNIT
BETA
TYPE-8,PROTEASOME
SUBUNIT BETA TYPE-5
PROTEASOME SUBUNIT
BETA
TYPE-6,PROTEASOME
SUBUNIT BETA
TYPE-1,PROTEASOME
SUBUNIT BETA
TYPE-6,PROTEASOME
SUBUNIT BETA
TYPE-1,PROTEASOME
SUBUNIT BETA TYPE-6)
4l5h VVTL1
(Vitis
vinifera)
4 / 8 THR A 104
ALA A 196
ASP A 202
SER A 206
None
1.07A 5l5fY-4l5hA:
undetectable
5l5fZ-4l5hA:
undetectable
5l5fY-4l5hA:
21.65
5l5fZ-4l5hA:
20.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NY7_A_NCAA303_0
(AMIDASE)
4l5h VVTL1
(Vitis
vinifera)
4 / 6 GLY A 158
THR A  86
GLU A  85
SER A  73
None
0.93A 5ny7A-4l5hA:
undetectable
5ny7A-4l5hA:
22.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ODI_G_ACTG702_0
(HETERODISULFIDE
REDUCTASE, SUBUNIT A)
4l5h VVTL1
(Vitis
vinifera)
3 / 3 GLY A  70
THR A  72
ASN A 128
None
0.56A 5odiG-4l5hA:
undetectable
5odiG-4l5hA:
15.07