SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4lly'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HUO_A_PNNA302_0
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)		 4lly MUTATED PERTUZUMAB
FAB HEAVY CHAIN
(Homo
sapiens) 		4 / 6 LEU A 195
GLY A 196
ALA A 131
PRO A 132
 None
 0.39A 3huoA-4llyA:
undetectable		 3huoA-4llyA:
20.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JWQ_B_VIAB901_1
(CGMP-SPECIFIC
3',5'-CYCLIC
PHOSPHODIESTERASE
CATALYTIC DOMAIN,
CONE CGMP-SPECIFIC
3',5'-CYCLIC
PHOSPHODIESTERASE
SUBUNIT ALPHA
CHIMERA)		 4lly MUTATED PERTUZUMAB
FAB HEAVY CHAIN
(Homo
sapiens) 		5 / 11 TYR A 151
HIS A 206
LEU A 114
ALA A 174
THR A  91
 None
 1.20A 3jwqB-4llyA:
undetectable
3jwqC-4llyA:
undetectable		 3jwqB-4llyA:
19.96
3jwqC-4llyA:
19.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ECM_D_LEUD602_0
(JASMONIC ACID-AMIDO
SYNTHETASE JAR1)		 4lly MUTATED PERTUZUMAB
FAB HEAVY CHAIN
(Homo
sapiens) 		4 / 7 ALA A  92
THR A  91
VAL A 115
GLU A  89
 None
 0.75A 5ecmD-4llyA:
undetectable		 5ecmD-4llyA:
20.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ECO_D_LEUD602_0
(JASMONIC ACID-AMIDO
SYNTHETASE JAR1)		 4lly MUTATED PERTUZUMAB
FAB HEAVY CHAIN
(Homo
sapiens) 		4 / 7 ALA A  92
THR A  91
VAL A 115
GLU A  89
 None
 0.82A 5ecoD-4llyA:
undetectable		 5ecoD-4llyA:
20.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X2T_I_PEMI202_1
(HEMOGLOBIN SUBUNIT
ALPHA
HEMOGLOBIN SUBUNIT
BETA)		 4lly MUTATED PERTUZUMAB
FAB HEAVY CHAIN
(Homo
sapiens) 		4 / 8 PRO A  53
ALA A  49
THR A  33
ALA A  24
 None
 1.03A 5x2tI-4llyA:
undetectable
5x2tJ-4llyA:
undetectable
5x2tK-4llyA:
undetectable
5x2tL-4llyA:
undetectable		 5x2tI-4llyA:
17.16
5x2tJ-4llyA:
16.67
5x2tK-4llyA:
17.16
5x2tL-4llyA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6A94_B_ZOTB3001_0
(5-HYDROXYTRYPTAMINE
RECEPTOR 2A,SOLUBLE
CYTOCHROME B562)		 4lly MUTATED PERTUZUMAB
FAB HEAVY CHAIN
(Homo
sapiens) 		6 / 12 VAL A 190
THR A 141
LEU A 165
VAL A 169
GLY A 168
VAL A 217
 None
 1.48A 6a94B-4llyA:
undetectable		 6a94B-4llyA:
21.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BPY_A_ACTA408_0
(THIOREDOXIN
REDUCTASE)		 4lly MUTATED PERTUZUMAB
FAB HEAVY CHAIN
(Homo
sapiens) 		3 / 3 PRO A 191
SER A 193
SER A 194
 None
 0.61A 6bpyA-4llyA:
undetectable		 6bpyA-4llyA:
23.14