SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4mag'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_A_DVAA6_0
(MINI-GRAMICIDIN A)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		3 / 3 ALA A  65
VAL A 214
TRP A 120
 None
 0.75A 1kqeA-4magA:
undetectable
1kqeE-4magA:
undetectable		 1kqeA-4magA:
4.05
1kqeE-4magA:
4.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_B_DVAB6_0
(MINI-GRAMICIDIN A)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		3 / 3 ALA A  65
VAL A 214
TRP A 120
 None
 0.77A 1kqeB-4magA:
undetectable
1kqeD-4magA:
undetectable		 1kqeB-4magA:
4.05
1kqeD-4magA:
4.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_D_DVAD6_0
(MINI-GRAMICIDIN A)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		3 / 3 TRP A 120
ALA A  65
VAL A 214
 None
 0.78A 1kqeB-4magA:
undetectable
1kqeD-4magA:
undetectable		 1kqeB-4magA:
4.05
1kqeD-4magA:
4.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_E_DVAE6_0
(MINI-GRAMICIDIN A)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		3 / 3 TRP A 120
ALA A  65
VAL A 214
 None
 0.80A 1kqeA-4magA:
undetectable
1kqeE-4magA:
undetectable		 1kqeA-4magA:
4.05
1kqeE-4magA:
4.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MIC_A_DVAA6_0
(GRAMICIDIN A)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		3 / 3 ALA A  65
VAL A 214
TRP A 120
 None
 0.89A 1micA-4magA:
undetectable
1micB-4magA:
undetectable		 1micA-4magA:
5.69
1micB-4magA:
5.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BDM_A_TMIA502_1
(CYTOCHROME P450 2B4)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		5 / 12 ILE A 231
ILE A 232
LEU A   4
THR A   3
LEU A  37
 None
 1.07A 2bdmA-4magA:
undetectable		 2bdmA-4magA:
21.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD3_A_CHDA501_0
(FERROCHELATASE)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		5 / 11 LEU A  27
LEU A  37
LEU A  39
ILE A 232
VAL A 214
 None
 1.16A 2qd3A-4magA:
undetectable		 2qd3A-4magA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GLQ_A_RABA602_2
(ADENOSYLHOMOCYSTEINA
SE)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		4 / 5 GLN A 245
GLU A 251
THR A 124
HIS A 206
 None
 1.28A 3glqA-4magA:
undetectable		 3glqA-4magA:
22.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4BBO_B_ACTB1114_0
(BLR5658 PROTEIN)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		3 / 3 TRP A  73
TRP A 114
THR A  56
 None
 1.16A 4bboB-4magA:
undetectable		 4bboB-4magA:
18.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EJG_A_NCTA501_1
(CYTOCHROME P450 2A13)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		4 / 7 ASN A 201
ALA A 203
THR A 205
LEU A 142
 None
 0.91A 4ejgA-4magA:
undetectable		 4ejgA-4magA:
22.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EJG_B_NCTB501_1
(CYTOCHROME P450 2A13)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		4 / 8 ASN A 201
ALA A 203
THR A 205
LEU A 142
 None
 0.92A 4ejgB-4magA:
undetectable		 4ejgB-4magA:
22.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F4D_A_CHDA504_0
(FERROCHELATASE,
MITOCHONDRIAL)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		5 / 12 LEU A  27
LEU A  37
LEU A  39
ILE A 232
VAL A 214
 None
 1.13A 4f4dA-4magA:
undetectable		 4f4dA-4magA:
19.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F4D_B_CHDB505_0
(FERROCHELATASE,
MITOCHONDRIAL)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		5 / 12 LEU A  27
LEU A  37
LEU A  39
ILE A 232
VAL A 214
 None
 1.18A 4f4dB-4magA:
undetectable		 4f4dB-4magA:
19.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OBW_D_SAMD601_0
(2-METHOXY-6-POLYPREN
YL-1,4-BENZOQUINOL
METHYLASE,
MITOCHONDRIAL)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		5 / 12 LYS A 150
ALA A  77
GLY A  71
GLY A 101
PHE A 100
 None
 1.23A 4obwD-4magA:
undetectable		 4obwD-4magA:
23.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z2D_F_LFXF102_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
SYMMETRIZED E-SITE
DNA)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		3 / 4 ARG A  69
GLY A  68
GLU A  66
 None
 0.67A 4z2dB-4magA:
undetectable
4z2dC-4magA:
undetectable		 4z2dB-4magA:
21.30
4z2dC-4magA:
23.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZDZ_A_TPFA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		4 / 7 ILE A  74
PHE A  67
GLY A 101
LEU A 296
 None
 0.92A 4zdzA-4magA:
undetectable		 4zdzA-4magA:
20.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ESJ_A_TPFA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		4 / 8 ILE A  74
PHE A  67
GLY A 101
LEU A 296
 None
 0.90A 5esjA-4magA:
undetectable		 5esjA-4magA:
20.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FXT_A_0LAA1376_1
(DNA POLYMERASE III
SUBUNIT BETA)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		4 / 7 LEU A 224
THR A 220
ILE A  62
LEU A  60
 None
 0.77A 5fxtA-4magA:
undetectable		 5fxtA-4magA:
23.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M0I_B_ACTB303_0
(SWI5-DEPENDENT HO
EXPRESSION PROTEIN 2)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		4 / 5 THR A 266
ASN A 134
ASP A 138
LEU A 133
 None
 1.19A 5m0iB-4magA:
undetectable		 5m0iB-4magA:
22.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BEE_B_RXMB601_0
(SCAFFOLD PROTEIN D13)		 4mag SIALIC ACID BINDING
PROTEIN
(Vibrio
cholerae) 		5 / 9 PHE A 168
PHE A 195
VAL A 265
VAL A 171
GLN A 199
 SO4  A 402 ( 4.0A)
None
None
None
None
 1.49A 6beeA-4magA:
0.0
6beeB-4magA:
0.0
6beeC-4magA:
0.0		 6beeA-4magA:
18.39
6beeB-4magA:
18.39
6beeC-4magA:
18.39