SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4n88'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3APX_A_Z80A190_1
(ALPHA-1-ACID
GLYCOPROTEIN 2)
4n88 UNCHARACTERIZED
PROTEIN

(Pseudomonas
aeruginosa)
5 / 12 GLU B  55
LEU B  65
ARG B  63
GLU B 123
ALA B 133
None
1.33A 3apxA-4n88B:
undetectable
3apxA-4n88B:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KOX_A_RFPA502_2
(PENTACHLOROPHENOL
4-MONOOXYGENASE)
4n88 UNCHARACTERIZED
PROTEIN

(Pseudomonas
aeruginosa)
3 / 3 VAL B  36
ARG B  89
PRO B 111
None
0.80A 5koxA-4n88B:
undetectable
5koxA-4n88B:
15.30