SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4nhd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1A28_B_STRB2_1
(PROGESTERONE
RECEPTOR)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 LEU A 240
LEU A 299
LEU A 313
MET A 116
LEU A 219
None
1.21A 1a28B-4nhdA:
undetectable
1a28B-4nhdA:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P7L_C_SAMC685_1
(S-ADENOSYLMETHIONINE
SYNTHETASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.72A 1p7lD-4nhdA:
undetectable
1p7lD-4nhdA:
24.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P7L_C_SAMC885_0
(S-ADENOSYLMETHIONINE
SYNTHETASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.72A 1p7lC-4nhdA:
undetectable
1p7lC-4nhdA:
24.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q23_A_FUAA702_1
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 THR A 278
SER A 275
LEU A 189
VAL A 211
ALA A 215
None
SCY  A 112 ( 3.3A)
COA  A 401 (-4.2A)
COA  A 401 (-3.9A)
None
1.34A 1q23A-4nhdA:
undetectable
1q23B-4nhdA:
undetectable
1q23A-4nhdA:
21.97
1q23B-4nhdA:
21.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q23_H_FUAH709_1
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 SER A 275
LEU A 189
VAL A 211
VAL A 216
ALA A 215
SCY  A 112 ( 3.3A)
COA  A 401 (-4.2A)
COA  A 401 (-3.9A)
None
None
1.20A 1q23H-4nhdA:
undetectable
1q23I-4nhdA:
undetectable
1q23H-4nhdA:
21.97
1q23I-4nhdA:
21.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R5L_A_VIVA301_0
(PROTEIN
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN))
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 ILE A 174
VAL A 279
VAL A 265
ILE A 292
ILE A   5
None
1.26A 1r5lA-4nhdA:
undetectable
1r5lA-4nhdA:
21.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_A_SAMA385_1
(S-ADENOSYLMETHIONINE
SYNTHETASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.70A 1rg9B-4nhdA:
undetectable
1rg9B-4nhdA:
24.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_B_SAMB485_0
(S-ADENOSYLMETHIONINE
SYNTHETASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.71A 1rg9A-4nhdA:
undetectable
1rg9A-4nhdA:
24.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_C_SAMC585_1
(S-ADENOSYLMETHIONINE
SYNTHETASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.71A 1rg9D-4nhdA:
undetectable
1rg9D-4nhdA:
24.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_C_SAMC685_0
(S-ADENOSYLMETHIONINE
SYNTHETASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.71A 1rg9C-4nhdA:
undetectable
1rg9C-4nhdA:
24.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1XVA_A_SAMA293_0
(GLYCINE
N-METHYLTRANSFERASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 VAL A  78
ASP A 107
SER A  84
GLY A 158
ILE A  44
None
1.35A 1xvaA-4nhdA:
undetectable
1xvaA-4nhdA:
24.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HZQ_A_STRA300_1
(APOLIPOPROTEIN D)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 7 THR A  81
ALA A 245
ASN A 273
PHE A 157
None
COA  A 401 (-3.3A)
COA  A 401 (-3.7A)
COA  A 401 (-4.6A)
1.20A 2hzqA-4nhdA:
undetectable
2hzqA-4nhdA:
20.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NV4_A_SAMA201_0
(UPF0066 PROTEIN
AF_0241)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 GLN A  15
ASP A 159
GLY A 272
LEU A 268
SER A 143
None
1.21A 2nv4A-4nhdA:
undetectable
2nv4A-4nhdA:
18.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QL8_A_BEZA143_0
(PUTATIVE REDOX
PROTEIN)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 7 ALA A 254
THR A 253
ALA A 252
PRO A 242
None
0.80A 2ql8A-4nhdA:
undetectable
2ql8B-4nhdA:
undetectable
2ql8A-4nhdA:
17.87
2ql8B-4nhdA:
17.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E00_A_9CRA7223_1
(RETINOIC ACID
RECEPTOR RXR-ALPHA)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 ALA A  90
GLN A  93
ALA A  52
VAL A 134
CYH A 103
None
1.03A 3e00A-4nhdA:
undetectable
3e00A-4nhdA:
22.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GV1_A_BEZA302_0
(DISULFIDE
INTERCHANGE PROTEIN)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 6 HIS A 271
LEU A  12
ALA A  58
PRO A 280
None
1.27A 3gv1A-4nhdA:
undetectable
3gv1C-4nhdA:
undetectable
3gv1A-4nhdA:
15.89
3gv1C-4nhdA:
15.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GV1_B_BEZB301_0
(DISULFIDE
INTERCHANGE PROTEIN)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 6 LEU A  12
ALA A  58
PRO A 280
HIS A 271
None
1.22A 3gv1A-4nhdA:
undetectable
3gv1B-4nhdA:
undetectable
3gv1A-4nhdA:
15.89
3gv1B-4nhdA:
15.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3P2K_C_SAMC6735_0
(16S RRNA METHYLASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 GLY A 306
GLY A 183
ALA A 110
ALA A 111
LEU A 188
None
None
None
SCY  A 112 ( 2.7A)
None
1.04A 3p2kC-4nhdA:
undetectable
3p2kC-4nhdA:
23.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3P2K_D_SAMD6735_0
(16S RRNA METHYLASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 GLY A 306
GLY A 183
ALA A 110
ALA A 111
LEU A 188
None
None
None
SCY  A 112 ( 2.7A)
None
1.05A 3p2kD-4nhdA:
undetectable
3p2kD-4nhdA:
23.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EAT_B_BEZB1000_0
(BENZOATE-COENZYME A
LIGASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 9 ALA A  66
GLY A   7
ILE A  63
HIS A 133
ILE A  68
None
1.14A 4eatB-4nhdA:
undetectable
4eatB-4nhdA:
21.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G1B_C_ECNC403_1
(FLAVOHEMOGLOBIN)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 9 ILE A 292
LEU A 298
VAL A 314
VAL A 279
LEU A 283
None
1.19A 4g1bC-4nhdA:
undetectable
4g1bC-4nhdA:
25.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J24_A_ESTA600_1
(ESTROGEN RECEPTOR
BETA)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 LEU A 219
LEU A 222
LEU A 299
ILE A 249
ILE A 250
None
0.91A 4j24A-4nhdA:
undetectable
4j24A-4nhdA:
23.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J24_B_ESTB600_1
(ESTROGEN RECEPTOR
BETA)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 LEU A 219
LEU A 222
LEU A 299
ILE A 249
ILE A 250
None
0.95A 4j24B-4nhdA:
undetectable
4j24B-4nhdA:
23.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KTT_C_SAMC404_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.77A 4kttD-4nhdA:
undetectable
4kttD-4nhdA:
22.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L9Q_B_9TPB601_1
(SERUM ALBUMIN)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 PRO A 280
ALA A 118
ILE A  63
LEU A   6
GLY A  67
None
1.06A 4l9qB-4nhdA:
undetectable
4l9qB-4nhdA:
20.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MM8_A_RFXA603_1
(TRANSPORTER)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 ASP A 182
VAL A 214
ALA A 215
GLY A 186
GLY A 304
None
None
None
None
SCY  A 112 ( 3.3A)
1.08A 4mm8A-4nhdA:
undetectable
4mm8A-4nhdA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NDN_A_SAMA407_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.79A 4ndnB-4nhdA:
undetectable
4ndnB-4nhdA:
22.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NDN_C_SAMC405_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.78A 4ndnD-4nhdA:
undetectable
4ndnD-4nhdA:
22.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O8F_B_BRLB501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 SER A 311
HIS A 178
LEU A 175
MET A 232
LEU A 222
None
1.48A 4o8fB-4nhdA:
undetectable
4o8fB-4nhdA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UIL_H_QI9H1223_0
(FAB 314.1)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 HIS A 243
ALA A 245
GLY A 305
GLY A 310
LEU A 219
SCY  A 112 (-3.8A)
COA  A 401 (-3.3A)
SCY  A 112 ( 3.8A)
None
None
1.03A 4uilH-4nhdA:
undetectable
4uilL-4nhdA:
undetectable
4uilH-4nhdA:
19.81
4uilL-4nhdA:
21.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FHZ_A_REAA602_1
(ALDEHYDE
DEHYDROGENASE FAMILY
1 MEMBER A3)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 GLY A 305
LEU A 189
MET A 206
CYH A 146
THR A 145
SCY  A 112 ( 3.8A)
COA  A 401 (-4.2A)
COA  A 401 (-3.8A)
None
None
1.45A 5fhzA-4nhdA:
undetectable
5fhzA-4nhdA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OM2_B_DXTB501_1
(ALPHA-1-ANTICHYMOTRY
PSIN)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 9 VAL A 166
LEU A 119
ALA A 118
PHE A 115
ILE A   5
None
1.15A 5om2A-4nhdA:
undetectable
5om2B-4nhdA:
undetectable
5om2A-4nhdA:
13.64
5om2B-4nhdA:
12.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5T8S_B_SAMB402_0
(S-ADENOSYLMETHIONINE
SYNTHASE)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 8 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.75A 5t8sA-4nhdA:
undetectable
5t8sA-4nhdA:
25.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UBB_A_SAMA301_0
(ALPHA N-TERMINAL
PROTEIN
METHYLTRANSFERASE 1B)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 GLY A 208
VAL A 214
SER A 152
HIS A 205
LEU A 204
COA  A 401 (-3.3A)
None
None
None
None
1.24A 5ubbA-4nhdA:
undetectable
5ubbA-4nhdA:
25.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BQ4_A_ADNA401_1
(THERMOSPERMINE
SYNTHASE ACAULIS
PROTEIN)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
5 / 12 ILE A   5
VAL A 136
LEU A 300
ALA A 312
LEU A 298
None
1.02A 6bq4A-4nhdA:
undetectable
6bq4A-4nhdA:
13.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FBN_B_SAMB401_0
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
4nhd 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 1

(Vibrio
cholerae)
4 / 7 ALA A 105
ASP A  72
ILE A  73
ILE A  63
None
0.84A 6fbnA-4nhdA:
undetectable
6fbnA-4nhdA:
22.93