SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4o89'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2B60_B_RITB100_1
(GAG-POL POLYPROTEIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 GLY A 296
ILE A 145
ILE A 289
ALA A 139
ILE A 143
None
0.77A 2b60A-4o89A:
undetectable
2b60A-4o89A:
16.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2B60_B_RITB100_2
(GAG-POL POLYPROTEIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 11 GLY A 296
ILE A 145
ILE A 289
ALA A 139
ILE A 143
None
0.73A 2b60B-4o89A:
undetectable
2b60B-4o89A:
16.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXE_A_1FLA2001_1
(SERUM ALBUMIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 11 LEU A 132
ILE A 149
VAL A 168
GLY A 147
LEU A 103
None
1.28A 2bxeA-4o89A:
undetectable
2bxeA-4o89A:
18.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXE_B_1FLB2001_1
(SERUM ALBUMIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 LEU A 132
ILE A 149
VAL A 168
GLY A 147
LEU A 103
None
1.27A 2bxeB-4o89A:
undetectable
2bxeB-4o89A:
18.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FN1_B_SALB503_1
(SALICYLATE
SYNTHETASE, IRP9)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 11 ILE A  95
GLY A  90
HIS A  50
THR A 118
GLY A 120
None
1.37A 2fn1B-4o89A:
undetectable
2fn1B-4o89A:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2RKF_A_AB1A501_1
(PROTEASE RETROPEPSIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 GLY A 296
ILE A 145
ILE A 289
ALA A 139
ILE A 143
None
0.78A 2rkfA-4o89A:
undetectable
2rkfA-4o89A:
17.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VH3_A_DAHA2_1
(RANASMURFIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 9 ALA A 206
ALA A 202
SER A 234
GLY A 253
ALA A 259
None
1.39A 2vh3A-4o89A:
undetectable
2vh3A-4o89A:
16.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BWC_B_SAMB501_0
(SPERMIDINE SYNTHASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 LEU A 132
HIS A 193
ILE A 163
ASP A 122
ILE A 117
None
0.96A 3bwcB-4o89A:
undetectable
3bwcB-4o89A:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K9F_H_LFXH0_1
(DNA TOPOISOMERASE 4
SUBUNIT A
DNA TOPOISOMERASE 4
SUBUNIT B)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
4 / 6 ARG A 154
GLY A 190
GLU A 241
GLU A 189
None
1.10A 3k9fA-4o89A:
2.2
3k9fB-4o89A:
2.3
3k9fD-4o89A:
undetectable
3k9fA-4o89A:
23.31
3k9fB-4o89A:
23.31
3k9fD-4o89A:
23.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_K_TFPK202_1
(PROTEIN S100-A4)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 LEU A  16
SER A  19
ILE A  52
LEU A  73
SER A 317
None
1.10A 3ko0K-4o89A:
undetectable
3ko0L-4o89A:
undetectable
3ko0S-4o89A:
undetectable
3ko0T-4o89A:
undetectable
3ko0K-4o89A:
15.84
3ko0L-4o89A:
15.84
3ko0S-4o89A:
15.84
3ko0T-4o89A:
15.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N6D_B_H4BB600_1
(NITRIC OXIDE
SYNTHASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
4 / 6 TRP A 171
PHE A 291
VAL A 168
PRO A 290
None
1.33A 3n6dA-4o89A:
2.8
3n6dB-4o89A:
undetectable
3n6dA-4o89A:
20.93
3n6dB-4o89A:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R24_A_SAMA302_0
(2'-O-METHYL
TRANSFERASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 ASN A  41
GLY A  13
PRO A  42
GLY A  43
ASP A 286
None
CIT  A 401 (-3.2A)
None
None
None
1.09A 3r24A-4o89A:
undetectable
3r24A-4o89A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TGV_B_BEZB1_0
(HEME-BINDING PROTEIN
HUTZ)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
4 / 6 GLN A 100
PHE A 291
PRO A 290
LEU A 288
None
1.03A 3tgvB-4o89A:
undetectable
3tgvB-4o89A:
18.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TGV_D_BEZD1_0
(HEME-BINDING PROTEIN
HUTZ)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
4 / 6 GLN A 100
PHE A 291
PRO A 290
LEU A 288
None
1.05A 3tgvD-4o89A:
undetectable
3tgvD-4o89A:
18.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5L_B_PXLB300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 9 GLY A 120
ASP A 122
GLY A 155
VAL A 164
HIS A 193
None
1.48A 4c5lB-4o89A:
undetectable
4c5lB-4o89A:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EM2_A_SALA504_1
(UNCHARACTERIZED
HTH-TYPE
TRANSCRIPTIONAL
REGULATOR SAR2349)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
4 / 8 GLY A 285
LEU A 288
ILE A 289
ILE A 335
None
0.63A 4em2A-4o89A:
undetectable
4em2A-4o89A:
18.77
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4O8J_A_ADNA401_1
(RNA 3'-TERMINAL
PHOSPHATE CYCLASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
11 / 12 GLN A  14
ARG A  17
LEU A  97
PRO A 127
PRO A 128
TYR A 131
ASP A 250
PHE A 283
ASP A 286
GLN A 287
HIS A 307
None
CIT  A 401 (-3.0A)
None
None
None
None
None
None
None
None
None
0.96A 4o8jA-4o89A:
56.9
4o8jA-4o89A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4O8J_A_ADNA401_1
(RNA 3'-TERMINAL
PHOSPHATE CYCLASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
6 / 12 LEU A  97
GLN A 100
PRO A 127
ASP A 286
GLN A 287
HIS A 307
None
1.18A 4o8jA-4o89A:
56.9
4o8jA-4o89A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4O8J_B_ADNB401_1
(RNA 3'-TERMINAL
PHOSPHATE CYCLASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
11 / 12 GLN A  14
ARG A  17
LEU A  97
PRO A 127
PRO A 128
TYR A 131
ASP A 250
PHE A 283
ASP A 286
GLN A 287
HIS A 307
None
CIT  A 401 (-3.0A)
None
None
None
None
None
None
None
None
None
1.01A 4o8jB-4o89A:
56.8
4o8jB-4o89A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4O8J_B_ADNB401_1
(RNA 3'-TERMINAL
PHOSPHATE CYCLASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
6 / 12 LEU A  97
GLN A 100
PRO A 127
ASP A 286
GLN A 287
HIS A 307
None
1.20A 4o8jB-4o89A:
56.8
4o8jB-4o89A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P65_A_IPHA101_0
(INSULIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 10 CYH A 279
LEU A 245
ALA A 139
LEU A 292
LEU A 284
None
1.17A 4p65A-4o89A:
undetectable
4p65B-4o89A:
undetectable
4p65F-4o89A:
undetectable
4p65H-4o89A:
undetectable
4p65A-4o89A:
8.28
4p65B-4o89A:
7.54
4p65F-4o89A:
7.54
4p65H-4o89A:
7.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P65_A_IPHA101_0
(INSULIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 10 CYH A 279
LEU A 245
LEU A 177
ALA A 139
LEU A 284
None
1.20A 4p65A-4o89A:
undetectable
4p65B-4o89A:
undetectable
4p65F-4o89A:
undetectable
4p65H-4o89A:
undetectable
4p65A-4o89A:
8.28
4p65B-4o89A:
7.54
4p65F-4o89A:
7.54
4p65H-4o89A:
7.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P65_C_IPHC101_0
(INSULIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 11 CYH A 279
LEU A 245
ALA A 139
LEU A 284
LEU A 292
None
1.12A 4p65C-4o89A:
undetectable
4p65D-4o89A:
undetectable
4p65J-4o89A:
undetectable
4p65L-4o89A:
undetectable
4p65C-4o89A:
8.28
4p65D-4o89A:
7.54
4p65J-4o89A:
7.54
4p65L-4o89A:
7.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YMG_B_SAMB1001_1
(PUTATIVE
SAM-DEPENDENT
O-METHYLTRANFERASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
3 / 3 SER A 295
GLU A 141
GLU A 241
None
0.83A 4ymgB-4o89A:
undetectable
4ymgB-4o89A:
22.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5H8T_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 LEU A 284
LEU A 245
ALA A 139
ILE A 322
ILE A 299
None
1.07A 5h8tA-4o89A:
undetectable
5h8tA-4o89A:
18.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N5D_A_SAMA306_1
(METHYLTRANSFERASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
4 / 7 LEU A 140
PHE A 291
SER A 295
ILE A 335
None
0.92A 5n5dA-4o89A:
4.0
5n5dA-4o89A:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VYH_A_FOLA409_0
(S PROTEIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 10 PRO A 258
ALA A 206
GLY A 190
ILE A 222
ALA A 202
None
1.35A 5vyhA-4o89A:
undetectable
5vyhA-4o89A:
21.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BRD_B_RFPB502_1
(RIFAMPIN
MONOOXYGENASE)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 GLY A 166
ARG A 116
THR A 121
GLY A 120
GLY A 119
None
1.11A 6brdB-4o89A:
undetectable
6brdB-4o89A:
16.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CK2_C_IPHC101_0
(INSULIN A CHAIN
INSULIN B CHAIN)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
4 / 4 ILE A  95
LEU A 102
HIS A  50
ALA A  54
None
0.78A 6ck2C-4o89A:
undetectable
6ck2D-4o89A:
undetectable
6ck2C-4o89A:
8.28
6ck2D-4o89A:
7.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DRX_A_H8GA1201_0
(5HT2B RECEPTOR, BRIL
CHIMERA)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 LEU A  16
VAL A  20
SER A  23
THR A  24
ALA A  59
None
1.03A 6drxA-4o89A:
undetectable
6drxA-4o89A:
22.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DRX_A_H8GA1201_0
(5HT2B RECEPTOR, BRIL
CHIMERA)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 12 VAL A  20
SER A  23
THR A  24
ALA A  59
VAL A  74
None
1.43A 6drxA-4o89A:
undetectable
6drxA-4o89A:
22.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6NQA_K_SAMK500_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE,
H3 LYSINE-79
SPECIFIC)
4o89 RNA 3'-TERMINAL
PHOSPHATE CYCLASE

(Pyrococcus
horikoshii)
5 / 10 ASP A 122
GLY A 155
GLY A 120
VAL A 129
LYS A 159
None
1.40A 6nqaK-4o89A:
undetectable
6nqaK-4o89A:
21.43