SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4okq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1L2I_A_CCSA417_0
(ESTROGEN RECEPTOR)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
3 / 3 GLU A  56
LYS A  50
VAL A  52
None
1.00A 1l2iA-4okqA:
undetectable
1l2iA-4okqA:
20.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1N4H_A_REAA500_1
(NUCLEAR RECEPTOR
ROR-BETA)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
5 / 11 ILE A  80
ALA A  79
VAL A 124
VAL A  65
ALA A  58
None
1.02A 1n4hA-4okqA:
undetectable
1n4hA-4okqA:
19.77
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1WMQ_A_HISA2001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 6 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.19A 1wmqA-4okqA:
24.0
1wmqA-4okqA:
57.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1WMQ_B_HISB1001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 6 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.20A 1wmqB-4okqA:
24.1
1wmqB-4okqA:
57.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1WPU_A_HISA2001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 6 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.19A 1wpuA-4okqA:
24.5
1wpuA-4okqA:
57.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1WPU_B_HISB1001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 6 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.18A 1wpuB-4okqA:
24.5
1wpuB-4okqA:
57.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1WRQ_A_HISA2001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 6 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.25A 1wrqA-4okqA:
24.0
1wrqA-4okqA:
57.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1WRQ_B_HISB1001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 6 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.25A 1wrqB-4okqA:
24.1
1wrqB-4okqA:
57.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1XDK_B_9CRB600_1
(RETINOIC ACID
RECEPTOR, BETA)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
5 / 12 ALA A 106
LEU A 144
ILE A 146
ILE A 122
LEU A  14
None
1.13A 1xdkB-4okqA:
undetectable
1xdkB-4okqA:
23.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ITZ_A_IREA2021_2
(EPIDERMAL GROWTH
FACTOR RECEPTOR)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
3 / 3 LEU A 137
LEU A  94
MET A  46
None
0.83A 2itzA-4okqA:
undetectable
2itzA-4okqA:
18.52
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3BOY_A_HISA1001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 10 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.16A 3boyA-4okqA:
24.3
3boyC-4okqA:
24.4
3boyA-4okqA:
57.72
3boyC-4okqA:
57.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3BOY_A_HISA2001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 10 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.16A 3boyA-4okqA:
24.3
3boyB-4okqA:
24.8
3boyA-4okqA:
57.72
3boyB-4okqA:
57.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3BOY_A_HISA3001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
6 / 10 ARG A  89
ARG A  99
ILE A 130
GLY A 131
ALA A 132
HIS A 139
None
0.18A 3boyB-4okqA:
24.8
3boyC-4okqA:
24.4
3boyB-4okqA:
57.72
3boyC-4okqA:
57.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XQE_A_AG2A506_1
(HOMOSPERMIDINE
SYNTHASE)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
4 / 6 ARG A 109
ARG A  71
VAL A  65
ASP A  72
None
0.95A 4xqeA-4okqA:
undetectable
4xqeA-4okqA:
15.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XQE_B_AG2B505_1
(HOMOSPERMIDINE
SYNTHASE)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
4 / 6 ARG A 109
ARG A  71
VAL A  65
ASP A  72
None
0.94A 4xqeB-4okqA:
undetectable
4xqeB-4okqA:
15.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XQG_A_AG2A505_1
(HOMOSPERMIDINE
SYNTHASE)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
4 / 8 ARG A 109
ARG A  71
VAL A  65
ASP A  72
None
0.93A 4xqgA-4okqA:
undetectable
4xqgA-4okqA:
15.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XQG_B_AG2B505_1
(HOMOSPERMIDINE
SYNTHASE)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
4 / 8 ARG A 109
ARG A  71
VAL A  65
ASP A  72
None
0.95A 4xqgB-4okqA:
undetectable
4xqgB-4okqA:
15.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y03_A_SALA801_1
(PROTEIN POLYBROMO-1)
4okq HUT OPERON POSITIVE
REGULATORY PROTEIN

(Geobacillus
thermodenitrific
ans)
4 / 7 ILE A  55
LEU A 103
ALA A  83
ILE A  80
None
0.71A 4y03A-4okqA:
undetectable
4y03A-4okqA:
20.26