SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4pq1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1CET_A_CLQA1001_0
(PROTEIN (L-LACTATE
DEHYDROGENASE))
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
5 / 9 VAL A  65
GLY A  57
ILE A  55
PHE A 139
ILE A 110
None
1.09A 1cetA-4pq1A:
undetectable
1cetA-4pq1A:
19.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P7R_A_NCTA440_1
(CYTOCHROME P450-CAM)
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
4 / 7 VAL A 148
VAL A 112
ASP A 136
ILE A 110
None
1.01A 1p7rA-4pq1A:
undetectable
1p7rA-4pq1A:
17.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R30_A_SAMA501_0
(BIOTIN SYNTHASE)
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
5 / 12 GLY A  47
ILE A 157
LEU A  77
VAL A  76
LEU A 185
None
1.19A 1r30A-4pq1A:
undetectable
1r30A-4pq1A:
19.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R30_B_SAMB501_0
(BIOTIN SYNTHASE)
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
5 / 12 GLY A  47
ILE A 157
LEU A  77
VAL A  76
LEU A 185
None
1.19A 1r30B-4pq1A:
undetectable
1r30B-4pq1A:
19.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T7I_A_017A200_2
(POL POLYPROTEIN)
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
4 / 7 ASP A  93
VAL A  97
ILE A 157
THR A 106
None
0.71A 1t7iB-4pq1A:
undetectable
1t7iB-4pq1A:
21.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T7J_A_478A200_2
(POL POLYPROTEIN)
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
4 / 7 ASP A  93
VAL A  97
ILE A 157
THR A 106
None
0.69A 1t7jB-4pq1A:
undetectable
1t7jB-4pq1A:
21.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y05_A_RALA801_1
(PROSTAGLANDIN
REDUCTASE 1)
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
4 / 8 VAL A 107
TYR A 131
VAL A 173
VAL A 158
None
1.10A 2y05A-4pq1A:
undetectable
2y05B-4pq1A:
undetectable
2y05A-4pq1A:
20.06
2y05B-4pq1A:
20.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EJJ_A_NCTA501_1
(CYTOCHROME P450 2A6)
4pq1 PUTATIVE ELECTRON
TRANSPORT RELATED
PROTEIN

(Corynebacterium
diphtheriae)
4 / 7 PHE A 139
ASN A 111
GLY A 109
ILE A  55
None
0.89A 4ejjA-4pq1A:
undetectable
4ejjA-4pq1A:
14.71