SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4pv6'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7H_B_SAMB530_1
(TYPE I RESTRICTION
ENZYME ECOKI M
PROTEIN)
4pv6 N-TERMINAL
ACETYLTRANSFERASE
COMPLEX SUBUNIT
[ARD1]

(Thermoplasma
volcanium)
3 / 3 TYR C  70
GLU C 114
THR C 134
None
0.83A 2y7hB-4pv6C:
undetectable
2y7hB-4pv6C:
14.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DFB_B_KANB401_1
(APH(2')-ID)
4pv6 N-TERMINAL
ACETYLTRANSFERASE
COMPLEX SUBUNIT
[ARD1]

(Thermoplasma
volcanium)
5 / 10 ASP C 118
SER C 145
ASP C 143
GLU C  34
GLU C 114
None
1.45A 4dfbB-4pv6C:
0.0
4dfbB-4pv6C:
18.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4E1G_A_LNLA701_2
(PROSTAGLANDIN G/H
SYNTHASE 2)
4pv6 N-TERMINAL
ACETYLTRANSFERASE
COMPLEX SUBUNIT
[ARD1]

(Thermoplasma
volcanium)
4 / 5 ARG C 152
LEU C 102
SER C 101
MET C 108
None
1.28A 4e1gA-4pv6C:
undetectable
4e1gA-4pv6C:
12.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZZB_E_ACTE403_0
(PROTON-GATED ION
CHANNEL)
4pv6 N-TERMINAL
ACETYLTRANSFERASE
COMPLEX SUBUNIT
[ARD1]

(Thermoplasma
volcanium)
3 / 3 ARG C  76
TYR C 140
GLU C 114
None
0.65A 4zzbE-4pv6C:
undetectable
4zzbE-4pv6C:
19.18