SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4qb9'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1CLA_A_CLMA221_0
(TYPE III
CHLORAMPHENICOL
ACETYLTRANSFERASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 10 ALA A 109
ALA A 116
LEU A 353
VAL A 318
ILE A 296
 None
 1.27A 1claA-4qb9A:
undetectable		 1claA-4qb9A:
19.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HRK_A_CHDA1501_0
(FERROCHELATASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 LEU A 277
LEU A 255
HIS A 247
LEU A 239
VAL A 236
 None
 1.23A 1hrkA-4qb9A:
undetectable		 1hrkA-4qb9A:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1IE9_A_VDXA500_2
(VITAMIN D3 RECEPTOR)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 4 LEU A 254
ILE A 174
ARG A 177
TRP A 178
 None
 1.26A 1ie9A-4qb9A:
undetectable		 1ie9A-4qb9A:
20.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JFF_B_TA1B601_1
(TUBULIN BETA CHAIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.17A 1jffB-4qb9A:
undetectable		 1jffB-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MX1_F_THAF6_1
(LIVER
CARBOXYLESTERASE I)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 GLY A 124
GLY A 123
SER A 121
LEU A  97
PHE A  26
 None
None
PAR  A 500 (-3.0A)
None
PAR  A 500 (-3.7A)
 0.97A 1mx1F-4qb9A:
undetectable		 1mx1F-4qb9A:
21.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1X8V_A_ESLA471_1
(CYTOCHROME P450 51)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 TYR A 219
ARG A 177
ALA A 246
LEU A 239
 None
 1.08A 1x8vA-4qb9A:
undetectable		 1x8vA-4qb9A:
24.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BM9_D_SAMD301_0
(CEPHALOSPORIN
HYDROXYLASE CMCI)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 LEU A  63
LEU A 104
GLY A  60
ALA A  86
ALA A  25
 None
 1.13A 2bm9D-4qb9A:
undetectable		 2bm9D-4qb9A:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BM9_D_SAMD301_1
(CEPHALOSPORIN
HYDROXYLASE CMCI)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		3 / 3 ASP A 352
ASP A 317
ASN A 373
 None
 0.78A 2bm9D-4qb9A:
undetectable		 2bm9D-4qb9A:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BR4_E_SAME301_0
(CEPHALOSPORIN
HYDROXYLASE CMCI)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 LEU A  63
LEU A 104
GLY A  60
ALA A  86
ALA A  25
 None
 1.17A 2br4E-4qb9A:
undetectable		 2br4E-4qb9A:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HRE_D_CHDD702_0
(FERROCHELATASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		3 / 3 ARG A 337
GLY A  73
PRO A  72
 None
 0.70A 2hreD-4qb9A:
undetectable		 2hreD-4qb9A:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HXF_B_TA1B601_1
(TUBULIN BETA CHAIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.17A 2hxfB-4qb9A:
undetectable		 2hxfB-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HXH_B_TA1B601_1
(TUBULIN BETA CHAIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.17A 2hxhB-4qb9A:
undetectable		 2hxhB-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2P4N_B_TA1B601_1
(TUBULIN BETA CHAIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.17A 2p4nB-4qb9A:
undetectable		 2p4nB-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WBE_B_TA1B1439_1
(TUBULIN BETA-2B
CHAIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.17A 2wbeB-4qb9A:
undetectable		 2wbeB-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WEY_A_EV1A1771_1
(CAMP AND
CAMP-INHIBITED CGMP
3', 5'-CYCLIC
PHOSPHODIESTERASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 LEU A 356
LEU A 316
VAL A 314
ILE A 333
PHE A 386
 None
 0.89A 2weyA-4qb9A:
undetectable		 2weyA-4qb9A:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WEY_B_EV1B1771_1
(CAMP AND
CAMP-INHIBITED CGMP
3', 5'-CYCLIC
PHOSPHODIESTERASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 LEU A 356
VAL A 314
ILE A 333
PHE A 386
 None
 0.97A 2weyB-4qb9A:
undetectable		 2weyB-4qb9A:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZLC_A_VDXA500_2
(VITAMIN D3 RECEPTOR)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 5 LEU A 254
ILE A 174
ARG A 177
TRP A 178
 None
 1.24A 2zlcA-4qb9A:
undetectable		 2zlcA-4qb9A:
21.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZUL_A_SAMA376_0
(PROBABLE RIBOSOMAL
RNA SMALL SUBUNIT
METHYLTRANSFERASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 GLY A 214
ALA A 212
LEU A 221
ASP A 217
VAL A 242
 None
 1.06A 2zulA-4qb9A:
undetectable		 2zulA-4qb9A:
23.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DCO_B_TA1B601_1
(BOVINE BETA TUBULIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.17A 3dcoB-4qb9A:
undetectable		 3dcoB-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EDL_B_TA1B601_1
(BETA TUBULIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.18A 3edlB-4qb9A:
undetectable		 3edlB-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IZ0_B_TA1B820_1
(BETA TUBULIN, CHAIN
B FROM PDB 1JFF)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ASP A 199
GLU A 209
LEU A 254
LEU A 257
GLY A 207
 None
 1.16A 3iz0B-4qb9A:
undetectable		 3iz0B-4qb9A:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V35_A_NTIA317_1
(ALDOSE REDUCTASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 HIS A 247
TRP A 251
PHE A 149
PRO A 280
 None
 1.22A 3v35A-4qb9A:
undetectable		 3v35A-4qb9A:
25.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C9P_A_CAMA423_0
(CYTOCHROME P450)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 9 TYR A 400
LEU A 398
GLY A 184
VAL A  79
VAL A 117
 None
 1.22A 4c9pA-4qb9A:
undetectable		 4c9pA-4qb9A:
24.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FOX_E_D16E301_1
(THYMIDYLATE SYNTHASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 HIS A 364
ILE A 294
LEU A 398
GLY A 184
TYR A 400
 None
 1.23A 4foxE-4qb9A:
undetectable		 4foxE-4qb9A:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FOX_G_D16G301_1
(THYMIDYLATE SYNTHASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 HIS A 364
ILE A 294
LEU A 398
GLY A 184
TYR A 400
 None
 1.23A 4foxG-4qb9A:
undetectable		 4foxG-4qb9A:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G77_A_TLFA711_0
(LACTOTRANSFERRIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 7 ILE A 108
LEU A 104
ALA A  80
VAL A  79
 None
 0.73A 4g77A-4qb9A:
undetectable		 4g77A-4qb9A:
22.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4M6T_A_SAMA201_0
(RNA POLYMERASE
II-ASSOCIATED FACTOR
1 HOMOLOG, LINKER,
RNA
POLYMERASE-ASSOCIATE
D PROTEIN LEO1)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 4 ILE A 260
VAL A 236
VAL A 224
ARG A 232
 None
 1.38A 4m6tA-4qb9A:
undetectable		 4m6tA-4qb9A:
16.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UG5_A_H4BA902_1
(NITRIC OXIDE
SYNTHASE OXYGENASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		3 / 3 ARG A 188
THR A  34
TRP A  38
 None
 1.26A 4ug5A-4qb9A:
undetectable		 4ug5A-4qb9A:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y0R_A_PX9A201_0
(BETA-LACTOGLOBULIN)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 VAL A 355
LEU A 303
LEU A 331
LEU A 359
ILE A 349
 None
 0.97A 4y0rA-4qb9A:
1.8		 4y0rA-4qb9A:
16.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y8W_A_STRA604_1
(CYTOCHROME P450
21-HYDROXYLASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 VAL A 366
VAL A 355
LEU A 356
ILE A 351
LEU A 312
 None
 0.98A 4y8wA-4qb9A:
undetectable		 4y8wA-4qb9A:
23.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y8W_B_STRB603_1
(CYTOCHROME P450
21-HYDROXYLASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 VAL A 366
VAL A 355
LEU A 356
ILE A 351
LEU A 312
 None
 0.95A 4y8wB-4qb9A:
undetectable		 4y8wB-4qb9A:
23.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BPH_C_ACTC403_0
(D-ALANINE--D-ALANINE
LIGASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 4 TYR A 101
GLY A  81
SER A  83
LEU A 118
 None
None
PAR  A 500 (-4.4A)
PAR  A 500 ( 4.5A)
 1.32A 5bphC-4qb9A:
undetectable		 5bphC-4qb9A:
22.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CDN_G_EVPG2101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT
B,DNA GYRASE SUBUNIT
B)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 6 SER A 121
GLU A 122
GLY A 130
ARG A 128
GLY A 127
 PAR  A 500 (-3.0A)
None
None
None
None
 1.49A 5cdnA-4qb9A:
undetectable
5cdnB-4qb9A:
undetectable		 5cdnA-4qb9A:
21.00
5cdnB-4qb9A:
20.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GWZ_D_010D6_0
(N-[(5-METHYLISOXAZOL
-3-YL)CARBONYL]ALANY
L-L-VALYL-N~1~-((1R,
2Z)-4-(BENZYLOXY)-4-
OXO-1-{[(3R)-2-OXOPY
RROLIDIN-3-YL]METHYL
}BUT-2-ENYL)-L-LEUCI
NAMIDE
PEDV MAIN PROTEASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		3 / 3 MET A 297
HIS A 105
GLY A 130
 None
 0.77A 5gwzB-4qb9A:
undetectable		 5gwzB-4qb9A:
22.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WYQ_A_SAMA401_0
(TRNA
(GUANINE-N(1)-)-METH
YLTRANSFERASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 GLY A 132
ILE A 351
LEU A 359
GLY A 358
GLY A 357
 None
 0.94A 5wyqA-4qb9A:
undetectable		 5wyqA-4qb9A:
24.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WYQ_B_SAMB301_0
(TRNA
(GUANINE-N(1)-)-METH
YLTRANSFERASE)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 GLY A 132
ILE A 351
LEU A 359
GLY A 358
GLY A 357
 None
 1.00A 5wyqB-4qb9A:
undetectable		 5wyqB-4qb9A:
24.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6G2P_B_TRPB502_0
(FLAVIN-DEPENDENT
L-TRYPTOPHAN OXIDASE
VIOA)		 4qb9 ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 10 TYR A 360
ALA A 134
LEU A 292
LEU A  69
VAL A 117
 None
 1.44A 6g2pB-4qb9A:
undetectable		 6g2pB-4qb9A:
25.05