SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4rm4'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DDR_B_MTXB200_1
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.12A 1ddrB-4rm4A:
undetectable
1ddrB-4rm4A:
16.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JOL_A_FFOA161_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.13A 1jolA-4rm4A:
undetectable
1jolA-4rm4A:
15.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JOL_B_FFOB361_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.13A 1jolB-4rm4A:
undetectable
1jolB-4rm4A:
15.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1N13_H_AG2H7012_1
(PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 6 GLU A 358
LEU A 354
LEU A 148
GLY A 149
None
HEM  A 401 (-4.7A)
None
None
0.92A 1n13H-4rm4A:
undetectable
1n13K-4rm4A:
undetectable
1n13H-4rm4A:
14.87
1n13K-4rm4A:
9.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RXC_D_URFD2021_1
(URIDINE
PHOSPHORYLASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 7 GLN A 157
ILE A 198
VAL A 150
PRO A 151
None
1.08A 1rxcD-4rm4A:
undetectable
1rxcD-4rm4A:
21.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RXC_F_URFF2001_1
(URIDINE
PHOSPHORYLASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 7 GLN A 157
ILE A 198
VAL A 150
PRO A 151
None
1.08A 1rxcF-4rm4A:
undetectable
1rxcF-4rm4A:
21.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TDR_A_MTXA170_1
(TELLUROMETHIONYL
DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.11A 1tdrA-4rm4A:
undetectable
1tdrA-4rm4A:
14.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1W0F_A_STRA1499_1
(CYTOCHROME P450 3A4)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 4 PHE A 392
ASP A 134
PHE A 129
VAL A 394
None
1.28A 1w0fA-4rm4A:
31.2
1w0fA-4rm4A:
24.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NYR_B_SVRB401_2
(NAD-DEPENDENT
DEACETYLASE
SIRTUIN-5)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 6 ARG A 184
ASN A  79
ASN A  45
LEU A 311
None
1.17A 2nyrA-4rm4A:
undetectable
2nyrA-4rm4A:
23.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CL9_A_MTXA602_2
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE (DHFR-TS))
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 4 VAL A 238
ARG A  93
ILE A 210
THR A 243
None
HEM  A 401 (-3.9A)
None
HEM  A 401 (-3.7A)
1.39A 3cl9A-4rm4A:
undetectable
3cl9A-4rm4A:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E4E_A_4PZA501_1
(CYTOCHROME P450 2E1)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
3 / 3 ALA A 239
THR A 243
CYH A 349
HEM  A 401 (-3.6A)
HEM  A 401 (-3.7A)
HEM  A 401 (-2.3A)
0.50A 3e4eA-4rm4A:
30.2
3e4eA-4rm4A:
25.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E4E_B_4PZB501_1
(CYTOCHROME P450 2E1)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
3 / 3 ALA A 239
THR A 243
CYH A 349
HEM  A 401 (-3.6A)
HEM  A 401 (-3.7A)
HEM  A 401 (-2.3A)
0.45A 3e4eB-4rm4A:
30.1
3e4eB-4rm4A:
25.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QL0_A_FOLA160_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.15A 3ql0A-4rm4A:
undetectable
3ql0A-4rm4A:
16.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUF_B_SUEB1201_3
(NS3 PROTEASE, NS4A
PROTEIN)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 5 SER A 316
PRO A 287
TYR A 387
VAL A 288
None
1.42A 3sufC-4rm4A:
undetectable
3sufC-4rm4A:
19.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A79_A_P1BA601_1
(AMINE OXIDASE
[FLAVIN-CONTAINING]
B)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 PRO A 138
LEU A 119
LEU A 366
ILE A 248
TYR A 262
None
1.22A 4a79A-4rm4A:
undetectable
4a79A-4rm4A:
22.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A79_B_P1BB601_1
(AMINE OXIDASE
[FLAVIN-CONTAINING]
B)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 PRO A 138
LEU A 119
LEU A 366
ILE A 248
TYR A 262
None
1.19A 4a79B-4rm4A:
undetectable
4a79B-4rm4A:
22.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4CX7_C_H4BC600_1
(NITRIC OXIDE
SYNTHASE, INDUCIBLE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 8 SER A 249
MET A 252
ILE A 248
PHE A 135
None
1.18A 4cx7C-4rm4A:
0.0
4cx7D-4rm4A:
undetectable
4cx7C-4rm4A:
21.41
4cx7D-4rm4A:
21.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4E1V_B_URFB1301_1
(URIDINE
PHOSPHORYLASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 7 GLN A 157
ILE A 198
VAL A 150
PRO A 151
None
1.07A 4e1vB-4rm4A:
undetectable
4e1vB-4rm4A:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J24_D_ESTD600_1
(ESTROGEN RECEPTOR
BETA)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 LEU A 354
ALA A 355
LEU A 236
ILE A  82
LEU A 235
HEM  A 401 (-4.7A)
HEM  A 401 (-3.5A)
HEM  A 401 ( 4.1A)
HEM  A 401 (-4.0A)
HEM  A 401 ( 4.4A)
1.15A 4j24D-4rm4A:
undetectable
4j24D-4rm4A:
22.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4M51_A_BEZA501_0
(AMIDOHYDROLASE
FAMILY PROTEIN)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 6 ILE A 248
SER A 136
PHE A 123
LEU A 119
None
0.92A 4m51A-4rm4A:
undetectable
4m51A-4rm4A:
23.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QLF_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 11 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.10A 4qlfA-4rm4A:
undetectable
4qlfA-4rm4A:
15.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QLG_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.17A 4qlgA-4rm4A:
undetectable
4qlgA-4rm4A:
16.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QLG_B_FOLB201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.13A 4qlgB-4rm4A:
undetectable
4qlgB-4rm4A:
16.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R3A_A_RBFA402_1
(BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ALA A 286
ILE A 386
ILE A  82
ASN A  83
ASN A  79
HEM  A 401 ( 4.5A)
None
HEM  A 401 (-4.0A)
None
None
1.18A 4r3aA-4rm4A:
undetectable
4r3aA-4rm4A:
23.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RGC_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.20A 4rgcA-4rm4A:
undetectable
4rgcA-4rm4A:
16.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X5H_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.15A 4x5hA-4rm4A:
undetectable
4x5hA-4rm4A:
16.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E8Q_B_FOLB201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.07A 5e8qB-4rm4A:
undetectable
5e8qB-4rm4A:
15.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EAJ_B_FOLB201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.07A 5eajB-4rm4A:
undetectable
5eajB-4rm4A:
15.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5J6H_A_NCAA402_0
(H-2 CLASS I
HISTOCOMPATIBILITY
ANTIGEN, Q10 ALPHA
CHAIN)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
3 / 3 PRO A 327
ARG A 319
GLU A 321
None
0.74A 5j6hA-4rm4A:
undetectable
5j6hA-4rm4A:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JGL_B_SAMB301_0
(UBIE/COQ5 FAMILY
METHYLTRANSFERASE,
PUTATIVE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ALA A 355
GLY A 351
LEU A 357
ALA A 359
PRO A 273
HEM  A 401 (-3.5A)
HEM  A 401 (-3.5A)
None
None
None
0.90A 5jglB-4rm4A:
undetectable
5jglB-4rm4A:
22.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MZJ_A_TEPA2401_1
(ADENOSINE RECEPTOR
A2A,SOLUBLE
CYTOCHROME
B562,ADENOSINE
RECEPTOR A2A)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
4 / 8 LEU A 236
PHE A 100
LEU A 214
ILE A 213
HEM  A 401 ( 4.1A)
None
None
None
0.98A 5mzjA-4rm4A:
undetectable
5mzjA-4rm4A:
20.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UJX_B_FOLB201_0
(DIHYDROFOLATE
REDUCTASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
5 / 12 ILE A  81
LEU A 229
PHE A 232
ILE A 210
LEU A 236
HEM  A 401 (-4.3A)
None
None
None
HEM  A 401 ( 4.1A)
1.07A 5ujxB-4rm4A:
undetectable
5ujxB-4rm4A:
15.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AF6_A_GLYA507_0
(L-PROLYL-[PEPTIDYL-C
ARRIER PROTEIN]
DEHYDROGENASE)
4rm4 CYTOCHROME P450
(Bacillus
subtilis)
3 / 3 TYR A 262
HIS A 372
MET A 396
None
1.22A 6af6A-4rm4A:
2.6
6af6A-4rm4A:
20.00