SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4sbv'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A3A_A_TEPA1435_1
(CHITINASE)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
3 / 3 TRP A  99
GLU A  73
TYR A 246
None
1.09A 2a3aA-4sbvA:
undetectable
2a3aA-4sbvA:
21.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F78_A_BEZA1003_0
(HTH-TYPE
TRANSCRIPTIONAL
REGULATOR BENM)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
4 / 7 SER A 245
LEU A 120
PHE A 170
THR A 184
None
1.10A 2f78A-4sbvA:
undetectable
2f78A-4sbvA:
23.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IV6_D_SAMD301_0
(PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
5 / 12 SER A  75
THR A  76
SER A 245
ILE A 185
LEU A 224
None
1.15A 3iv6D-4sbvA:
undetectable
3iv6D-4sbvA:
22.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X1I_B_LOCB502_1
(TUBULIN ALPHA CHAIN
TUBULIN BETA CHAIN)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
3 / 3 SER A 245
ALA A 114
VAL A 113
None
0.60A 4x1iA-4sbvA:
undetectable
4x1iA-4sbvA:
19.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LJB_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
5 / 12 ALA A 182
ARG A 116
TYR A 117
ILE A 185
LEU A  78
None
1.13A 5ljbA-4sbvA:
undetectable
5ljbA-4sbvA:
15.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LJC_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
5 / 12 ALA A 182
ARG A 116
TYR A 117
ILE A 185
LEU A  78
None
1.12A 5ljcA-4sbvA:
undetectable
5ljcA-4sbvA:
15.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LJC_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
5 / 12 PHE A 170
ARG A 116
TYR A 117
ILE A 185
LEU A  78
None
1.13A 5ljcA-4sbvA:
undetectable
5ljcA-4sbvA:
15.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DJZ_B_GMJB301_1
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
4sbv SOUTHERN BEAN MOSAIC
VIRUS COAT PROTEIN

(Southern
bean
mosaic
virus)
4 / 6 GLN A 136
VAL A 225
GLU A  89
ALA A 202
None
1.15A 6djzB-4sbvA:
undetectable
6djzB-4sbvA:
21.51