SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4ww3'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DCF_A_ACAA501_1
(6-AMINOHEXANOATE-DIM
ER HYDROLASE)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 6 ALA A 167
TYR A 177
ILE A 168
ILE A 117
 None
 1.23A 2dcfA-4ww3A:
undetectable		 2dcfA-4ww3A:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DYR_W_CHDW1060_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 1)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 7 ILE A 314
ARG A 133
MET A 126
LEU A  76
 None
BOG  A 405 (-3.6A)
None
None
 0.99A 2dyrN-4ww3A:
0.4
2dyrW-4ww3A:
undetectable		 2dyrN-4ww3A:
20.70
2dyrW-4ww3A:
9.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIN_W_CHDW1060_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 1)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 6 ILE A 314
ARG A 133
MET A 126
LEU A  76
 None
BOG  A 405 (-3.6A)
None
None
 1.00A 2einN-4ww3A:
2.7
2einW-4ww3A:
undetectable		 2einN-4ww3A:
20.70
2einW-4ww3A:
9.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PYM_A_1UNA1001_3
(PROTEASE RETROPEPSIN)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		3 / 3 ASP A  80
ASN A  52
THR A  60
 None
None
PLM  A 402 ( 4.2A)
 0.60A 2pymB-4ww3A:
undetectable		 2pymB-4ww3A:
17.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V0M_D_KLND1499_1
(CYTOCHROME P450 3A4)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 5 PHE A 188
PHE A 270
SER A  79
PHE A 205
 RET  A 401 (-4.7A)
None
None
RET  A 401 (-3.6A)
 1.26A 2v0mD-4ww3A:
undetectable		 2v0mD-4ww3A:
20.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YS6_A_GLYA431_0
(PHOSPHORIBOSYLGLYCIN
AMIDE SYNTHETASE)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 8 TYR A 134
ASN A 222
GLY A 138
PRO A 140
 None
 0.76A 2ys6A-4ww3A:
undetectable		 2ys6A-4ww3A:
21.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ABL_J_CHDJ60_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 1)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 7 ILE A 314
ARG A 133
MET A 126
LEU A  76
 None
BOG  A 405 (-3.6A)
None
None
 0.94A 3ablA-4ww3A:
1.6
3ablJ-4ww3A:
undetectable		 3ablA-4ww3A:
20.70
3ablJ-4ww3A:
9.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3D91_A_REMA350_2
(RENIN)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 5 TYR A 134
ALA A 260
ALA A 127
MET A 155
 None
 1.15A 3d91A-4ww3A:
undetectable		 3d91A-4ww3A:
23.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IV6_A_SAMA301_0
(PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		5 / 12 GLY A  88
THR A  93
PHE A  83
ASP A  80
ILE A 309
 None
 1.30A 3iv6A-4ww3A:
undetectable		 3iv6A-4ww3A:
19.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UQ6_A_ADNA401_2
(ADENOSINE KINASE,
PUTATIVE)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 5 LEU A 165
ALA A 167
PHE A 120
ASN A 200
 None
None
RET  A 401 (-4.0A)
None
 1.42A 3uq6A-4ww3A:
undetectable		 3uq6A-4ww3A:
21.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VAQ_A_ADNA401_2
(PUTATIVE ADENOSINE
KINASE)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 4 LEU A 165
ALA A 167
PHE A 120
ASN A 200
 None
None
RET  A 401 (-4.0A)
None
 1.39A 3vaqA-4ww3A:
undetectable		 3vaqA-4ww3A:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VAS_A_ADNA401_2
(PUTATIVE ADENOSINE
KINASE)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 4 LEU A 165
ALA A 167
PHE A 120
ASN A 200
 None
None
RET  A 401 (-4.0A)
None
 1.38A 3vasA-4ww3A:
undetectable		 3vasA-4ww3A:
21.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HDL_A_DXCA75_0
(PPCA)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 8 ILE A 216
ILE A 266
PHE A 270
GLY A 119
 None
None
None
RET  A 401 (-3.8A)
 0.76A 4hdlA-4ww3A:
undetectable		 4hdlA-4ww3A:
11.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LRH_D_FOLD301_1
(FOLATE RECEPTOR
ALPHA)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		3 / 3 HIS A  20
TRP A  12
SER A 192
 None
 1.15A 4lrhD-4ww3A:
undetectable		 4lrhD-4ww3A:
15.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QWP_B_GCSB304_1
(CHITOSANASE)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		3 / 3 GLN A 269
SER A  84
ASP A  80
 None
 0.96A 4qwpA-4ww3A:
0.6
4qwpB-4ww3A:
undetectable		 4qwpA-4ww3A:
20.85
4qwpB-4ww3A:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RZV_B_032B801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 5 ILE A 314
PHE A  72
SER A 316
ASP A  80
 None
None
PLM  A 403 (-3.1A)
None
 1.37A 4rzvB-4ww3A:
2.0		 4rzvB-4ww3A:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4V32_A_EF2A151_1
(CEREBLON ISOFORM 4)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 7 PRO A 276
PHE A 303
TRP A 274
PHE A  83
 None
None
RET  A 401 ( 4.4A)
None
 1.29A 4v32A-4ww3A:
undetectable		 4v32A-4ww3A:
17.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IY5_W_CHDW101_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 7 ILE A 314
ARG A 133
MET A 126
LEU A  76
 None
BOG  A 405 (-3.6A)
None
None
 0.89A 5iy5N-4ww3A:
1.8
5iy5W-4ww3A:
undetectable		 5iy5N-4ww3A:
20.70
5iy5W-4ww3A:
9.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z86_W_CHDW101_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 6 ILE A 314
ARG A 133
MET A 126
LEU A  76
 None
BOG  A 405 (-3.6A)
None
None
 1.02A 5z86N-4ww3A:
2.1
5z86W-4ww3A:
undetectable		 5z86N-4ww3A:
20.70
5z86W-4ww3A:
9.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCO_W_CHDW101_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 6 ILE A 314
ARG A 133
MET A 126
LEU A  76
 None
BOG  A 405 (-3.6A)
None
None
 1.02A 5zcoN-4ww3A:
1.6
5zcoW-4ww3A:
undetectable		 5zcoN-4ww3A:
20.70
5zcoW-4ww3A:
9.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FOS_A_PQNA2001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)		 4ww3 RHODOPSIN
(Todarodes
pacificus) 		4 / 6 TRP A 274
MET A  92
GLY A  45
ALA A 306
 RET  A 401 ( 4.4A)
None
None
None
 0.93A 6fosA-4ww3A:
2.5		 6fosA-4ww3A:
12.86