SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4xpu'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RI4_A_SAMA299_0
(MRNA CAPPING ENZYME)
4xpu ENDONUCLEASE V
(Escherichia
coli)
5 / 12 GLY A 106
GLY A 177
ILE A 174
ALA A 185
SER A 108
None
1.19A 1ri4A-4xpuA:
undetectable
1ri4A-4xpuA:
19.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XH9_A_J01A1437_1
(ORF12)
4xpu ENDONUCLEASE V
(Escherichia
coli)
5 / 11 THR A 127
ALA A  32
GLY A  33
ALA A  34
MET A  49
None
1.06A 2xh9A-4xpuA:
undetectable
2xh9A-4xpuA:
21.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N61_A_H4BA760_1
(NITRIC OXIDE
SYNTHASE)
4xpu ENDONUCLEASE V
(Escherichia
coli)
4 / 6 VAL A  36
VAL A 102
PHE A 119
GLU A  82
None
1.42A 3n61A-4xpuA:
undetectable
3n61B-4xpuA:
undetectable
3n61A-4xpuA:
20.28
3n61B-4xpuA:
20.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OKX_A_SAMA201_1
(YAEB-LIKE PROTEIN
RPA0152)
4xpu ENDONUCLEASE V
(Escherichia
coli)
4 / 5 HIS A 109
SER A 108
ARG A 197
ASP A 103
None
1.12A 3okxA-4xpuA:
undetectable
3okxA-4xpuA:
26.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SMT_A_ACTA500_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
SETD3)
4xpu ENDONUCLEASE V
(Escherichia
coli)
3 / 3 PHE A  77
SER A  79
GLN A  10
None
0.96A 3smtA-4xpuA:
undetectable
3smtA-4xpuA:
18.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKL_A_SUZA201_1
(TRANSTHYRETIN)
4xpu ENDONUCLEASE V
(Escherichia
coli)
4 / 7 LEU A 152
ALA A 175
LEU A 159
SER A 117
None
1.11A 4iklA-4xpuA:
undetectable
4iklB-4xpuA:
undetectable
4iklA-4xpuA:
18.89
4iklB-4xpuA:
18.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TZO_A_7V7A202_1
(ENDO-1,4-BETA-XYLANA
SE A)
4xpu ENDONUCLEASE V
(Escherichia
coli)
5 / 12 VAL A 102
ALA A  48
PRO A 126
ALA A  34
GLY A  33
None
1.17A 5tzoA-4xpuA:
undetectable
5tzoA-4xpuA:
21.10