SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4zjd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_B_DVAB6_0
(GRAMICIDIN A)		 4zjd AGGREGATION
SUPPRESSING PROTEIN
(Salmonella
enterica) 		3 / 3 TRP A  63
ALA A  43
VAL A  60
 None
 0.90A 1c4dA-4zjdA:
undetectable
1c4dB-4zjdA:
undetectable		 1c4dA-4zjdA:
7.27
1c4dB-4zjdA:
7.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_C_DVAC6_0
(GRAMICIDIN A)		 4zjd AGGREGATION
SUPPRESSING PROTEIN
(Salmonella
enterica) 		3 / 3 ALA A  43
VAL A  60
TRP A  63
 None
 0.94A 1c4dC-4zjdA:
undetectable
1c4dD-4zjdA:
undetectable		 1c4dC-4zjdA:
7.27
1c4dD-4zjdA:
7.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_D_DVAD6_0
(GRAMICIDIN A)		 4zjd AGGREGATION
SUPPRESSING PROTEIN
(Salmonella
enterica) 		3 / 3 TRP A  63
ALA A  43
VAL A  60
 None
 0.70A 1c4dC-4zjdA:
undetectable
1c4dD-4zjdA:
undetectable		 1c4dC-4zjdA:
7.27
1c4dD-4zjdA:
7.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_A_ACTA502_0
(RNA-DEPENDENT RNA
POLYMERASE)		 4zjd AGGREGATION
SUPPRESSING PROTEIN
(Salmonella
enterica) 		4 / 5 LYS A 120
LEU A 127
GLU A 129
LEU A  55
 None
 1.25A 4k4yA-4zjdA:
undetectable		 4k4yA-4zjdA:
15.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_E_ACTE503_0
(RNA-DEPENDENT RNA
POLYMERASE)		 4zjd AGGREGATION
SUPPRESSING PROTEIN
(Salmonella
enterica) 		4 / 4 LYS A 120
LEU A 127
GLU A 129
LEU A  55
 None
 1.27A 4k4yE-4zjdA:
undetectable		 4k4yE-4zjdA:
15.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_I_ACTI503_0
(RNA-DEPENDENT RNA
POLYMERASE)		 4zjd AGGREGATION
SUPPRESSING PROTEIN
(Salmonella
enterica) 		4 / 5 LYS A 120
LEU A 127
GLU A 129
LEU A  55
 None
 1.26A 4k4yI-4zjdA:
undetectable		 4k4yI-4zjdA:
15.84