SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4zqi'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1IG3_A_VIBA502_1
(THIAMIN
PYROPHOSPHOKINASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		4 / 8 SER A 274
SER A  86
ASP A  69
THR A  94
 None
None
None
NA  A 401 (-3.4A)
 1.08A 1ig3A-4zqiA:
undetectable
1ig3B-4zqiA:
undetectable		 1ig3A-4zqiA:
21.59
1ig3B-4zqiA:
21.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BFP_A_H4BA1290_1
(PTERIDINE REDUCTASE
1)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		4 / 8 SER A  91
LEU A   8
LEU A  81
LEU A  79
 None
 0.91A 2bfpA-4zqiA:
undetectable		 2bfpA-4zqiA:
22.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BYO_A_LNLA1216_1
(LIPOPROTEIN LPPX)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		4 / 5 LEU A 242
ILE A 192
LEU A 193
ARG A 300
 None
 0.99A 2byoA-4zqiA:
undetectable		 2byoA-4zqiA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2LBD_A_REAA500_1
(RETINOIC ACID
RECEPTOR GAMMA)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 12 LYS A 101
LEU A  93
ARG A  99
SER A 146
GLY A  87
 None
 1.23A 2lbdA-4zqiA:
undetectable		 2lbdA-4zqiA:
21.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_H_SVRH511_3
(PHOSPHOLIPASE A2)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		4 / 7 VAL A 115
ILE A 111
GLN A 105
LEU A 248
 None
 0.94A 3bjwH-4zqiA:
undetectable		 3bjwH-4zqiA:
15.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CKK_A_SAMA301_0
(TRNA
(GUANINE-N(7)-)-METH
YLTRANSFERASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 12 GLY A  85
ILE A 301
ALA A 305
THR A  94
GLU A  68
 None
None
None
NA  A 401 (-3.4A)
None
 1.08A 3ckkA-4zqiA:
undetectable		 3ckkA-4zqiA:
20.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F8W_B_ADNB301_1
(PURINE-NUCLEOSIDE
PHOSPHORYLASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 12 SER A  22
HIS A  63
GLY A  39
VAL A  40
VAL A  26
 None
 1.31A 3f8wB-4zqiA:
undetectable		 3f8wB-4zqiA:
24.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OXX_A_DR7A100_2
(HIV-1 PROTEASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 11 LEU A   8
GLY A  87
VAL A  88
VAL A  58
ILE A  60
 None
 1.02A 3oxxB-4zqiA:
undetectable		 3oxxB-4zqiA:
16.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WIP_G_ACTG305_0
(ACETYLCHOLINE-BINDIN
G PROTEIN)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		3 / 3 ASP A  44
ARG A  16
LYS A  43
 None
 1.19A 3wipG-4zqiA:
undetectable		 3wipG-4zqiA:
22.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DJE_A_C2FA300_0
(5-METHYLTETRAHYDROFO
LATE CORRINOID/IRON
SULFUR PROTEIN
METHYLTRANSFERASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 12 ASN A 272
LEU A 297
GLY A 252
SER A  86
GLN A  73
 None
 1.43A 4djeA-4zqiA:
undetectable		 4djeA-4zqiA:
23.03
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5BPH_A_ACTA403_0
(D-ALANINE--D-ALANINE
LIGASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		4 / 6 ARG A 255
GLY A 276
SER A 281
LEU A 282
 None
 0.21A 5bphA-4zqiA:
46.0		 5bphA-4zqiA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5BPH_B_ACTB404_0
(D-ALANINE--D-ALANINE
LIGASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		4 / 7 ARG A 255
GLY A 276
SER A 281
LEU A 282
 None
 0.63A 5bphB-4zqiA:
45.6		 5bphB-4zqiA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5BPH_D_ACTD403_0
(D-ALANINE--D-ALANINE
LIGASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		4 / 6 ARG A 255
GLY A 276
SER A 281
LEU A 282
 None
 0.57A 5bphD-4zqiA:
45.8		 5bphD-4zqiA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y7P_B_CHDB401_0
(BILE SALT HYDROLASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 10 LEU A  30
LEU A  50
LEU A  62
ALA A  61
LEU A   9
 None
 1.25A 5y7pB-4zqiA:
undetectable		 5y7pB-4zqiA:
25.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y7P_D_CHDD401_0
(BILE SALT HYDROLASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 10 LEU A  30
LEU A  50
LEU A  62
ALA A  61
LEU A   9
 None
 1.21A 5y7pD-4zqiA:
undetectable		 5y7pD-4zqiA:
25.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y7P_H_CHDH401_0
(BILE SALT HYDROLASE)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		5 / 10 LEU A  30
LEU A  50
LEU A  62
ALA A  61
LEU A   9
 None
 1.21A 5y7pH-4zqiA:
undetectable		 5y7pH-4zqiA:
25.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6A94_B_ZOTB3001_0
(5-HYDROXYTRYPTAMINE
RECEPTOR 2A,SOLUBLE
CYTOCHROME B562)		 4zqi D-ALANINE--D-ALANINE
LIGASE
(Yersinia
pestis) 		6 / 12 SER A 274
THR A 273
GLY A 252
SER A  86
PHE A  59
VAL A  26
 None
NA  A 401 (-2.9A)
None
None
None
None
 1.36A 6a94B-4zqiA:
undetectable		 6a94B-4zqiA:
22.60