SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ab8'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1QAB_E_RTLE1_0 (PROTEIN (RETINOL BINDING PROTEIN))	5ab8	GROUP 1 TRUNCATED HEMOGLOBIN GLBN (Mycobacterium tuberculosis)	5 / 11	PHE A 32 LEU A 98 MET A 77 LEU A 66 HIS A 81	FMT A1129 ( 4.9A) None HEM A 144 (-3.5A) None HEM A 144 ( 3.2A)	1.41A	1qabE-5ab8A: undetectable	1qabE-5ab8A: 20.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3BSZ_E_RTLE177_0 (PLASMA RETINOL-BINDING PROTEIN)	5ab8	GROUP 1 TRUNCATED HEMOGLOBIN GLBN (Mycobacterium tuberculosis)	5 / 11	LEU A 122 ALA A 64 ALA A 65 VAL A 126 GLN A 58	None ACT A1130 ( 4.0A) ACT A1130 ( 4.0A) None HEM A 144 ( 3.1A)	1.27A	3bszE-5ab8A: undetectable	3bszE-5ab8A: 19.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3MS9_B_STIB1_2 (TYROSINE-PROTEIN KINASE ABL1)	5ab8	GROUP 1 TRUNCATED HEMOGLOBIN GLBN (Mycobacterium tuberculosis)	4 / 7	VAL A 94 VAL A 29 ILE A 119 ARG A 84	HEM A 144 (-4.2A) None HEM A 144 ( 4.9A) HEM A 144 (-3.3A)	1.17A	3ms9B-5ab8A: undetectable	3ms9B-5ab8A: 16.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4G1B_A_ECNA403_1 (FLAVOHEMOGLOBIN)	5ab8	GROUP 1 TRUNCATED HEMOGLOBIN GLBN (Mycobacterium tuberculosis)	5 / 12	PHE A 32 TYR A 33 PHE A 46 VAL A 94 LEU A 98	FMT A1129 ( 4.9A) FMT A1129 (-4.1A) HEM A 144 ( 3.9A) HEM A 144 (-4.2A) None	0.85A	4g1bA-5ab8A: 9.3	4g1bA-5ab8A: 15.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5TDZ_A_ADNA905_1 (ATP-CITRATE SYNTHASE)	5ab8	GROUP 1 TRUNCATED HEMOGLOBIN GLBN (Mycobacterium tuberculosis)	4 / 6	ARG A 84 THR A 49 ARG A 53 LEU A 54	HEM A 144 (-3.3A) HEM A 144 ( 2.9A) HEM A 144 ( 3.3A) HEM A 144 (-4.7A)	1.04A	5tdzA-5ab8A: undetectable	5tdzA-5ab8A: 17.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6DWN_A_AQ4A602_1 (CYTOCHROME P450 1A1)	5ab8	GROUP 1 TRUNCATED HEMOGLOBIN GLBN (Mycobacterium tuberculosis)	4 / 5	ILE A 15 SER A 14 ALA A 24 LEU A 102	None	1.00A	6dwnA-5ab8A: undetectable	6dwnA-5ab8A: 18.66

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1QAB_E_RTLE1_0","PROTEIN (RETINOL BINDING PROTEIN)","5ab8","GROUP 1 TRUNCATED HEMOGLOBIN GLBN","Mycobacterium tuberculosis",5,"PHE A  32;LEU A  98;MET A  77;LEU A  66;HIS A  81","FMT A1129 ( 4.9A);None;HEM A 144 (-3.5A);None;HEM A 144 ( 3.2A)","1.41A","1qabE-5ab8A:undetectable","1qabE-5ab8A:20.44"],["3BSZ_E_RTLE177_0","PLASMA RETINOL-BINDING PROTEIN","5ab8","GROUP 1 TRUNCATED HEMOGLOBIN GLBN","Mycobacterium tuberculosis",5,"LEU A 122;ALA A  64;ALA A  65;VAL A 126;GLN A  58","None;ACT A1130 ( 4.0A);ACT A1130 ( 4.0A);None;HEM A 144 ( 3.1A)","1.27A","3bszE-5ab8A:undetectable","3bszE-5ab8A:19.41"],["3MS9_B_STIB1_2","TYROSINE-PROTEIN KINASE ABL1","5ab8","GROUP 1 TRUNCATED HEMOGLOBIN GLBN","Mycobacterium tuberculosis",4,"VAL A  94;VAL A  29;ILE A 119;ARG A  84","HEM A 144 (-4.2A);None;HEM A 144 ( 4.9A);HEM A 144 (-3.3A)","1.17A","3ms9B-5ab8A:undetectable","3ms9B-5ab8A:16.21"],["4G1B_A_ECNA403_1","FLAVOHEMOGLOBIN","5ab8","GROUP 1 TRUNCATED HEMOGLOBIN GLBN","Mycobacterium tuberculosis",5,"PHE A  32;TYR A  33;PHE A  46;VAL A  94;LEU A  98","FMT A1129 ( 4.9A);FMT A1129 (-4.1A);HEM A 144 ( 3.9A);HEM A 144 (-4.2A);None","0.85A","4g1bA-5ab8A:9.3","4g1bA-5ab8A:15.29"],["5TDZ_A_ADNA905_1","ATP-CITRATE SYNTHASE","5ab8","GROUP 1 TRUNCATED HEMOGLOBIN GLBN","Mycobacterium tuberculosis",4,"ARG A  84;THR A  49;ARG A  53;LEU A  54","HEM A 144 (-3.3A);HEM A 144 ( 2.9A);HEM A 144 ( 3.3A);HEM A 144 (-4.7A)","1.04A","5tdzA-5ab8A:undetectable","5tdzA-5ab8A:17.38"],["6DWN_A_AQ4A602_1","CYTOCHROME P450 1A1","5ab8","GROUP 1 TRUNCATED HEMOGLOBIN GLBN","Mycobacterium tuberculosis",4,"ILE A  15;SER A  14;ALA A  24;LEU A 102","None","1.00A","6dwnA-5ab8A:undetectable","6dwnA-5ab8A:18.66"]]