SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5b3n'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1H8S_A_AICA1000_1
(MUTANT AL2 6E7P9G)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
7 / 12 TYR A 178
GLN A 231
LEU A 238
PHE A 240
VAL A  39
ALA A  99
TRP A 113
None
0.69A 1h8sA-5b3nA:
21.8
1h8sA-5b3nA:
30.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Z11_A_8MOA501_0
(CYTOCHROME P450,
FAMILY 2, SUBFAMILY
A, POLYPEPTIDE 6)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
6 / 11 PHE A  31
ASN A  76
GLY A  57
THR A  60
ILE A  72
LEU A  81
None
1.40A 1z11A-5b3nA:
undetectable
1z11A-5b3nA:
17.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q6K_A_ADNA699_1
(CHLORINASE)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
4 / 7 ASP A 236
TYR A  61
TYR A  62
PRO A  63
None
1.35A 2q6kA-5b3nA:
undetectable
2q6kA-5b3nA:
22.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XN7_A_T44A1355_1
(THYROXINE-BINDING
GLOBULIN)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
5 / 10 LEU A  88
LEU A 119
SER A  23
LEU A  22
LEU A  20
None
1.11A 2xn7A-5b3nA:
undetectable
2xn7B-5b3nA:
undetectable
2xn7A-5b3nA:
20.60
2xn7B-5b3nA:
7.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3APW_B_DP0B190_1
(ALPHA-1-ACID
GLYCOPROTEIN 2)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
5 / 12 VAL A 151
ILE A 248
GLU A 223
ARG A 203
TYR A 228
None
1.24A 3apwB-5b3nA:
undetectable
3apwB-5b3nA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ARU_A_PNXA608_1
(CHITINASE A)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
4 / 6 TRP A 113
SER A  37
ALA A  35
HIS A 101
None
1.38A 3aruA-5b3nA:
6.3
3aruA-5b3nA:
19.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3LS4_H_TCIH220_2
(HEAVY CHAIN OF
ANTIBODY FAB
FRAGMENT
LIGHT CHAIN OF
ANTIBODY FAB
FRAGMENT)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
4 / 5 TYR A 178
GLN A 231
LEU A 238
PHE A 240
None
0.28A 3ls4L-5b3nA:
21.2
3ls4L-5b3nA:
63.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OU6_B_SAMB300_1
(SAM-DEPENDENT
METHYLTRANSFERASE)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
3 / 3 TYR A  61
ASP A 108
ASP A 111
None
0.67A 3ou6B-5b3nA:
undetectable
3ou6B-5b3nA:
22.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_A_MTXA2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
6 / 12 VAL A   4
ALA A  26
MET A  36
ARG A  74
ASN A  76
TYR A 112
None
1.09A 3qxvA-5b3nA:
20.6
3qxvA-5b3nA:
58.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RXH_A_HSMA7_1
(CATIONIC TRYPSIN)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
4 / 5 ASP A 168
SER A 173
SER A 194
GLY A 210
None
0.83A 3rxhA-5b3nA:
undetectable
3rxhA-5b3nA:
24.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_T_BEZT801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 2
BEZ-LEU-LEU)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
4 / 5 SER A  37
ALA A  51
HIS A 101
LEU A 238
None
1.32A 5dzkf-5b3nA:
undetectable
5dzkt-5b3nA:
undetectable
5dzkf-5b3nA:
22.42
5dzkt-5b3nA:
1.04
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6CJK_B_ACTB302_0
(IMMUNOGLOBULIN FAB
HEAVY CHAIN)
5b3n ANTI-H4K20ME1_SCFV
(Mus
musculus)
3 / 3 TYR A  62
GLY A  68
THR A  71
None
0.20A 6cjkB-5b3nA:
19.9
6cjkB-5b3nA:
37.40