SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5bqm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1XOZ_A_CIAA501_1
(CGMP-SPECIFIC
3',5'-CYCLIC
PHOSPHODIESTERASE)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		5 / 12 ALA B 799
ILE B 800
ILE B 640
PHE B 643
PHE B 671
 None
 0.89A 1xozA-5bqmB:
undetectable		 1xozA-5bqmB:
20.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YC2_A_NCAA506_0
(NAD-DEPENDENT
DEACETYLASE 2)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		4 / 6 SER B 646
PHE B 643
ASN B 674
ASP B 670
 None
 0.99A 1yc2A-5bqmB:
undetectable		 1yc2A-5bqmB:
20.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NYR_B_SVRB401_4
(NAD-DEPENDENT
DEACETYLASE
SIRTUIN-5)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		4 / 5 ALA B 633
ALA B 799
ALA B 802
VAL B 621
 None
 0.86A 2nyrB-5bqmB:
undetectable		 2nyrB-5bqmB:
17.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZJ0_D_2FAD500_2
(ADENOSYLHOMOCYSTEINA
SE)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		4 / 4 LEU B 647
GLN B 615
THR B 642
THR B 672
 None
 1.44A 2zj0D-5bqmB:
undetectable		 2zj0D-5bqmB:
21.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GWX_A_EPAA1_1
(PROTEIN (PEROXISOME
PROLIFERATOR
ACTIVATED RECEPTOR
(PPAR-DELTA)))		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		5 / 10 ILE B 834
LEU B 647
VAL B 667
VAL B 651
LEU B 626
 None
 1.06A 3gwxA-5bqmB:
undetectable		 3gwxA-5bqmB:
20.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3I45_A_NIOA500_1
(TWIN-ARGININE
TRANSLOCATION
PATHWAY SIGNAL
PROTEIN)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		4 / 8 SER B 614
GLU B 631
TYR B 611
LEU B 705
 None
 0.96A 3i45A-5bqmB:
undetectable		 3i45A-5bqmB:
21.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A97_C_ZPCC1318_1
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		5 / 12 VAL B 630
ILE B 700
GLU B 723
TYR B 605
VAL B 513
 None
 1.25A 4a97B-5bqmB:
3.6
4a97C-5bqmB:
undetectable		 4a97B-5bqmB:
20.74
4a97C-5bqmB:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PE5_B_QELB920_1
(GLUTAMATE RECEPTOR
IONOTROPIC, NMDA 1
GLUTAMATE RECEPTOR
IONOTROPIC, NMDA 2B)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		5 / 10 TYR B 641
THR B 627
LEU B 644
ALA B 799
ILE B 640
 None
 1.44A 4pe5A-5bqmB:
0.4
4pe5B-5bqmB:
undetectable		 4pe5A-5bqmB:
20.66
4pe5B-5bqmB:
20.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DHB_A_BEZA202_0
(HEPATITIS A VIRUS
CELLULAR RECEPTOR 2)		 5bqm SOMATOLIBERIN,BOTULI
NUM NEUROTOXIN TYPE
D
(Clostridium
botulinum;
Homo
sapiens) 		4 / 6 ARG B 759
ILE B 862
ASN B 866
ASP B 869
 None
 1.30A 6dhbA-5bqmB:
undetectable		 6dhbA-5bqmB:
13.28