SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5c0s'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJM_A_BJMA1_1
(DIPEPTIDYL PEPTIDASE
4)
5c0s HEMAGGLUTININ,
ENVELOPE
GLYCOPROTEIN,
FIBRITIN FUSION
PROTEIN

(Escherichia
virus
T4;
Human
immunodeficiency
virus
1;
Influenza
A
virus)
5 / 12 SER A 248
TYR A 244
TYR A 241
TYR A 239
ASN A 210
None
1.47A 3bjmA-5c0sA:
undetectable
3bjmA-5c0sA:
18.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W2T_A_LF7A801_1
(DIPEPTIDYL PEPTIDASE
4)
5c0s HEMAGGLUTININ,
ENVELOPE
GLYCOPROTEIN,
FIBRITIN FUSION
PROTEIN

(Escherichia
virus
T4;
Human
immunodeficiency
virus
1;
Influenza
A
virus)
5 / 12 SER A 248
TYR A 244
TYR A 241
TYR A 239
ASN A 210
None
1.50A 3w2tA-5c0sA:
undetectable
3w2tA-5c0sA:
18.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W2T_B_LF7B801_1
(DIPEPTIDYL PEPTIDASE
4)
5c0s HEMAGGLUTININ,
ENVELOPE
GLYCOPROTEIN,
FIBRITIN FUSION
PROTEIN

(Escherichia
virus
T4;
Human
immunodeficiency
virus
1;
Influenza
A
virus)
5 / 12 SER A 248
TYR A 244
TYR A 241
TYR A 239
ASN A 210
None
1.48A 3w2tB-5c0sA:
undetectable
3w2tB-5c0sA:
18.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5AJQ_A_DB8A800_2
(SERINE/THREONINE-PRO
TEIN KINASE 10)
5c0s HEMAGGLUTININ,
ENVELOPE
GLYCOPROTEIN,
FIBRITIN FUSION
PROTEIN

(Escherichia
virus
T4;
Human
immunodeficiency
virus
1;
Influenza
A
virus)
4 / 4 VAL A 103
ILE A  96
ASN A 186
VAL A  30
None
1.24A 5ajqA-5c0sA:
undetectable
5ajqA-5c0sA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B1E_B_LF7B801_1
(DIPEPTIDYL PEPTIDASE
4)
5c0s HEMAGGLUTININ,
ENVELOPE
GLYCOPROTEIN,
FIBRITIN FUSION
PROTEIN

(Escherichia
virus
T4;
Human
immunodeficiency
virus
1;
Influenza
A
virus)
5 / 12 SER A 248
TYR A 244
TYR A 241
TYR A 239
ASN A 210
None
1.49A 6b1eB-5c0sA:
undetectable
6b1eB-5c0sA:
18.99