SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5c8g'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q13_A_TESA501_1
(PROSTAGLANDIN-E2
9-REDUCTASE)
5c8g PP-BRD20
(Trypanosoma
brucei)
4 / 6 TYR A  33
TYR A  30
GLU A  44
PRO A   6
None
1.43A 1q13A-5c8gA:
undetectable
1q13A-5c8gA:
18.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JAY_A_SAMA1101_0
(STRUCTURAL PROTEIN
VP3)
5c8g PP-BRD20
(Trypanosoma
brucei)
5 / 12 ASN A  95
ARG A 121
ASP A  88
ILE A  85
ASN A  87
None
1.29A 3jayA-5c8gA:
undetectable
3jayA-5c8gA:
10.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JB3_A_SAMA1101_0
(STRUCTURAL PROTEIN
VP3)
5c8g PP-BRD20
(Trypanosoma
brucei)
5 / 12 ASN A  95
ARG A 121
ASP A  88
ILE A  85
ASN A  87
None
1.22A 3jb3A-5c8gA:
undetectable
3jb3A-5c8gA:
10.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4E1G_A_LNLA701_2
(PROSTAGLANDIN G/H
SYNTHASE 2)
5c8g PP-BRD20
(Trypanosoma
brucei)
4 / 5 ARG A  78
LEU A  66
SER A  65
MET A  86
None
0.90A 4e1gA-5c8gA:
undetectable
4e1gA-5c8gA:
11.74