SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5d4o'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5D4N_C_ACTC201_0
(NITROGEN REGULATORY
PROTEIN P-II)		 5d4o NITROGEN REGULATORY
PROTEIN P-II
(Thiomonas
intermedia) 		4 / 5 VAL A 100
GLY A 101
ARG A 102
PHE A 106
 BCT  A 202 (-3.5A)
BCT  A 202 (-3.5A)
BCT  A 202 (-3.7A)
AMP  A 203 (-4.3A)
 0.35A 5d4nA-5d4oA:
21.2
5d4nC-5d4oA:
17.4		 5d4nA-5d4oA:
100.00
5d4nC-5d4oA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IZJ_F_AZ1F2_1
(CAMP-DEPENDENT
PROTEIN KINASE
CATALYTIC SUBUNIT
ALPHA
47P-AZ1-DAR-DAR-DAR)		 5d4o NITROGEN REGULATORY
PROTEIN P-II
(Thiomonas
intermedia) 		4 / 7 GLY A  44
GLY A  46
SER A  47
GLY A  49
 ADP  A 201 (-2.8A)
ADP  A 201 (-2.9A)
ADP  A 201 (-2.4A)
ADP  A 201 (-4.3A)
 0.31A 5izjB-5d4oA:
undetectable		 5izjB-5d4oA:
17.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FGD_A_ACTA825_0
(GEPHYRIN)		 5d4o NITROGEN REGULATORY
PROTEIN P-II
(Thiomonas
intermedia) 		3 / 3 LYS A  10
VAL A  95
ASP A  97
 None
 0.46A 6fgdA-5d4oA:
undetectable		 6fgdA-5d4oA:
16.18