SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5day'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y69_C_CHDC1265_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 3)		 5day NAP1-RELATED PROTEIN
1
(Arabidopsis
thaliana) 		4 / 5 PHE A 132
PHE A 133
LEU A 138
PHE A 190
 None
 1.38A 2y69C-5dayA:
undetectable
2y69J-5dayA:
undetectable		 2y69C-5dayA:
21.27
2y69J-5dayA:
15.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_F_TFPF201_1
(PROTEIN S100-A4)		 5day NAP1-RELATED PROTEIN
1
(Arabidopsis
thaliana) 		4 / 5 PHE A 103
PHE A 127
PHE A 132
PHE A 133
 None
 1.46A 3ko0F-5dayA:
undetectable
3ko0G-5dayA:
undetectable		 3ko0F-5dayA:
18.41
3ko0G-5dayA:
18.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_B_W9TB513_1
(HEMOLYTIC LECTIN
CEL-III)		 5day NAP1-RELATED PROTEIN
1
(Arabidopsis
thaliana) 		4 / 6 THR A 221
ASN A 218
ASP A 214
ILE A 210
 None
 1.43A 3w9tB-5dayA:
undetectable		 3w9tB-5dayA:
18.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GKH_F_KANF301_1
(AMINOGLYCOSIDE
3'-PHOSPHOTRANSFERAS
E APHA1-IAB)		 5day NAP1-RELATED PROTEIN
1
(Arabidopsis
thaliana) 		4 / 8 ASP A 113
ARG A  70
ASN A  60
GLU A  56
 None
 1.10A 4gkhF-5dayA:
undetectable		 4gkhF-5dayA:
22.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WAU_C_CHDC306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 5day NAP1-RELATED PROTEIN
1
(Arabidopsis
thaliana) 		4 / 5 PHE A 132
PHE A 133
LEU A 138
PHE A 190
 None
 1.34A 5wauC-5dayA:
undetectable
5wauJ-5dayA:
undetectable		 5wauC-5dayA:
21.27
5wauJ-5dayA:
14.36