SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5dmd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VDB_A_NPSA1591_1
(SERUM ALBUMIN)		 5dmd FLAGELLAR ASSEMBLY
FACTOR FLIW
(Geobacillus
thermodenitrific
ans) 		4 / 8 ILE A 112
PHE A  34
LEU A  47
PHE A  57
 None
 0.94A 2vdbA-5dmdA:
undetectable		 2vdbA-5dmdA:
12.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MF6_A_BEZA303_0
(GLUTATHIONE
S-TRANSFERASE DOMAIN)		 5dmd FLAGELLAR ASSEMBLY
FACTOR FLIW
(Geobacillus
thermodenitrific
ans) 		4 / 5 THR A  42
PRO A  43
PHE A 138
TYR A  65
 None
 1.44A 4mf6A-5dmdA:
undetectable		 4mf6A-5dmdA:
19.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_C_PCFC1805_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)		 5dmd FLAGELLAR ASSEMBLY
FACTOR FLIW
(Geobacillus
thermodenitrific
ans) 		5 / 9 GLY A 121
LEU A  37
ILE A  25
GLY A  24
ILE A   3
 None
 0.78A 5vkqC-5dmdA:
undetectable
5vkqD-5dmdA:
undetectable		 5vkqC-5dmdA:
6.12
5vkqD-5dmdA:
6.12