SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5gaj'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1CMA_A_SAMA105_0 (PROTEIN (MET REPRESSOR))	5gaj	DE NOVO DESIGNED PROTEIN OR258 (synthetic construct)	4 / 8	ARG A 107 LEU A 122 GLU A 121 HIS A 131	None	0.96A	1cmaA-5gajA: undetectable 1cmaB-5gajA: undetectable	1cmaA-5gajA: 21.32 1cmaB-5gajA: 21.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1DB1_A_VDXA428_2 (VITAMIN D NUCLEAR RECEPTOR)	5gaj	DE NOVO DESIGNED PROTEIN OR258 (synthetic construct)	4 / 6	LEU A 23 ILE A 83 ARG A 107 VAL A 55	None	1.03A	1db1A-5gajA: undetectable	1db1A-5gajA: 18.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2Z9X_B_PXLB2503_1 (ASPARTATE AMINOTRANSFERASE)	5gaj	DE NOVO DESIGNED PROTEIN OR258 (synthetic construct)	5 / 11	PRO A 53 VAL A 126 LEU A 127 ASP A 26 VAL A 29	None	1.48A	2z9xB-5gajA: 2.1	2z9xB-5gajA: 15.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3HGX_A_SALA102_1 (SALICYLATE BIOSYNTHESIS PROTEIN PCHB)	5gaj	DE NOVO DESIGNED PROTEIN OR258 (synthetic construct)	4 / 7	VAL A 108 ILE A 95 TYR A 96 GLN A 89	None	1.02A	3hgxA-5gajA: undetectable	3hgxA-5gajA: 19.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6GSD_A_STRA401_0 (PROGESTERONE 5-BETA-REDUCTASE)	5gaj	DE NOVO DESIGNED PROTEIN OR258 (synthetic construct)	5 / 12	LYS A 37 VAL A 40 ILE A 69 VAL A 8 ILE A 6	None	1.33A	6gsdA-5gajA: 2.6	6gsdA-5gajA: 17.73

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1CMA_A_SAMA105_0","PROTEIN (MET REPRESSOR)","5gaj","DE NOVO DESIGNED PROTEIN OR258","synthetic construct",4,"ARG A 107;LEU A 122;GLU A 121;HIS A 131","None","0.96A","1cmaA-5gajA:undetectable;1cmaB-5gajA:undetectable","1cmaA-5gajA:21.32;1cmaB-5gajA:21.32"],["1DB1_A_VDXA428_2","VITAMIN D NUCLEAR RECEPTOR","5gaj","DE NOVO DESIGNED PROTEIN OR258","synthetic construct",4,"LEU A  23;ILE A  83;ARG A 107;VAL A  55","None","1.03A","1db1A-5gajA:undetectable","1db1A-5gajA:18.22"],["2Z9X_B_PXLB2503_1","ASPARTATE AMINOTRANSFERASE","5gaj","DE NOVO DESIGNED PROTEIN OR258","synthetic construct",5,"PRO A  53;VAL A 126;LEU A 127;ASP A  26;VAL A  29","None","1.48A","2z9xB-5gajA:2.1","2z9xB-5gajA:15.31"],["3HGX_A_SALA102_1","SALICYLATE BIOSYNTHESIS PROTEIN PCHB","5gaj","DE NOVO DESIGNED PROTEIN OR258","synthetic construct",4,"VAL A 108;ILE A  95;TYR A  96;GLN A  89","None","1.02A","3hgxA-5gajA:undetectable","3hgxA-5gajA:19.40"],["6GSD_A_STRA401_0","PROGESTERONE 5-BETA-REDUCTASE","5gaj","DE NOVO DESIGNED PROTEIN OR258","synthetic construct",5,"LYS A  37;VAL A  40;ILE A  69;VAL A   8;ILE A   6","None","1.33A","6gsdA-5gajA:2.6","6gsdA-5gajA:17.73"]]