SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5h6j'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
13GS_A_SASA211_1
(GLUTATHIONE
S-TRANSFERASE)
5h6j PIERISIN-1
(Pieris
rapae)
5 / 10 VAL A 113
VAL A 148
ILE A 177
PRO A  86
GLY A 171
None
1.41A 13gsA-5h6jA:
undetectable
13gsA-5h6jA:
22.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
13GS_B_SASB211_1
(GLUTATHIONE
S-TRANSFERASE)
5h6j PIERISIN-1
(Pieris
rapae)
5 / 9 VAL A 113
VAL A 148
ILE A 177
PRO A  86
GLY A 171
None
1.42A 13gsB-5h6jA:
undetectable
13gsB-5h6jA:
22.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BX4_A_ADNA355_1
(PROTEIN (ADENOSINE
KINASE))
5h6j PIERISIN-1
(Pieris
rapae)
6 / 12 THR A 115
ILE A  28
ALA A  15
GLY A 171
ALA A  14
ILE A  12
None
1.27A 1bx4A-5h6jA:
undetectable
1bx4A-5h6jA:
18.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RNR_A_DAHA208_1
(RIBONUCLEOTIDE
REDUCTASE R1 PROTEIN)
5h6j PIERISIN-1
(Pieris
rapae)
5 / 11 GLU A 182
ARG A 181
TYR A 140
SER A 179
PHE A  80
None
1.46A 1rnrA-5h6jA:
undetectable
1rnrA-5h6jA:
21.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXM_A_IMNA2001_1
(SERUM ALBUMIN)
5h6j PIERISIN-1
(Pieris
rapae)
4 / 8 ALA A  15
PHE A 168
ALA A 144
LEU A  68
None
0.81A 2bxmA-5h6jA:
undetectable
2bxmA-5h6jA:
16.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2P2F_B_ACTB653_0
(ACETYL-COENZYME A
SYNTHETASE)
5h6j PIERISIN-1
(Pieris
rapae)
4 / 4 VAL A  88
THR A  89
VAL A  17
GLY A 170
None
1.18A 2p2fB-5h6jA:
undetectable
2p2fB-5h6jA:
17.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZJ0_D_2FAD500_2
(ADENOSYLHOMOCYSTEINA
SE)
5h6j PIERISIN-1
(Pieris
rapae)
4 / 4 LEU A  68
GLN A 165
THR A 115
THR A  56
None
NAD  A 301 (-3.8A)
None
None
1.47A 2zj0D-5h6jA:
undetectable
2zj0D-5h6jA:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K37_A_BCZA468_1
(NEURAMINIDASE)
5h6j PIERISIN-1
(Pieris
rapae)
3 / 3 ASP A  72
ARG A  70
ARG A 227
NAD  A 301 (-3.8A)
NAD  A 301 (-3.4A)
None
0.90A 3k37A-5h6jA:
undetectable
3k37A-5h6jA:
18.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K9F_F_LFXF0_1
(DNA TOPOISOMERASE 4
SUBUNIT A
DNA TOPOISOMERASE 4
SUBUNIT B)
5h6j PIERISIN-1
(Pieris
rapae)
4 / 5 ARG A 218
ARG A 190
GLY A 224
GLU A 182
None
1.25A 3k9fA-5h6jA:
undetectable
3k9fB-5h6jA:
undetectable
3k9fC-5h6jA:
undetectable
3k9fA-5h6jA:
19.35
3k9fB-5h6jA:
19.35
3k9fC-5h6jA:
18.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KU1_G_SAMG226_0
(SAM-DEPENDENT
METHYLTRANSFERASE)
5h6j PIERISIN-1
(Pieris
rapae)
5 / 12 LEU A  53
GLY A 147
ASP A 149
GLY A 171
ILE A 172
None
1.19A 3ku1G-5h6jA:
undetectable
3ku1G-5h6jA:
22.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R29_A_SAMA301_0
(UNCHARACTERIZED
PROTEIN)
5h6j PIERISIN-1
(Pieris
rapae)
5 / 12 ALA A 167
SER A 114
GLN A 163
ALA A 157
TYR A 101
None
NAD  A 301 (-3.1A)
NAD  A 301 (-3.4A)
None
None
1.30A 4r29A-5h6jA:
undetectable
4r29A-5h6jA:
19.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z91_F_4LEF401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
5h6j PIERISIN-1
(Pieris
rapae)
4 / 7 LEU A  53
THR A  56
THR A 118
LEU A  68
None
0.93A 4z91F-5h6jA:
undetectable
4z91G-5h6jA:
undetectable
4z91H-5h6jA:
undetectable
4z91I-5h6jA:
undetectable
4z91J-5h6jA:
undetectable
4z91F-5h6jA:
21.21
4z91G-5h6jA:
21.21
4z91H-5h6jA:
21.21
4z91I-5h6jA:
21.21
4z91J-5h6jA:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IGP_A_ERYA402_0
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E)
5h6j PIERISIN-1
(Pieris
rapae)
5 / 12 PRO A  93
ALA A  14
ALA A  15
VAL A  17
GLY A 147
None
1.40A 5igpA-5h6jA:
undetectable
5igpA-5h6jA:
20.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TRQ_B_ACTB306_0
(WELO5)
5h6j PIERISIN-1
(Pieris
rapae)
3 / 3 GLU A 141
ARG A 178
TYR A 143
None
0.62A 5trqB-5h6jA:
undetectable
5trqB-5h6jA:
21.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VCE_A_RITA602_2
(CYTOCHROME P450 3A4)
5h6j PIERISIN-1
(Pieris
rapae)
4 / 6 ARG A  49
PHE A 112
PHE A 168
ILE A  12
None
1.03A 5vceA-5h6jA:
undetectable
5vceA-5h6jA:
19.33