SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5jb1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Z9H_B_IMNB381_1
(MEMBRANE-ASSOCIATED
PROSTAGLANDIN E
SYNTHASE-2)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		5 / 12 TYR A  70
THR A 332
PRO A 232
ILE A 158
LEU A 329
 None
 1.45A 1z9hB-5jb1A:
undetectable		 1z9hB-5jb1A:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Z9H_C_IMNC379_1
(MEMBRANE-ASSOCIATED
PROSTAGLANDIN E
SYNTHASE-2)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		5 / 12 TYR A  70
THR A 332
PRO A 232
ILE A 158
LEU A 329
 None
 1.45A 1z9hC-5jb1A:
undetectable		 1z9hC-5jb1A:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2P16_A_GG2A298_2
(COAGULATION FACTOR X
(EC 3.4.21.6)
(STUART FACTOR)
(STUART-PROWER
FACTOR))		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		3 / 3 ARG A  71
GLU A 369
GLN A  69
 None
 0.98A 2p16A-5jb1A:
undetectable		 2p16A-5jb1A:
16.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QHF_A_ACTA507_0
(CHORISMATE SYNTHASE)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		3 / 3 LEU A 384
ASN A  94
ARG A  97
 None
 0.86A 2qhfA-5jb1A:
undetectable		 2qhfA-5jb1A:
20.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FPJ_B_SAMB301_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		5 / 12 PHE A 377
ILE A 376
VAL A 103
ILE A 159
LEU A 373
 None
 1.23A 3fpjB-5jb1A:
undetectable		 3fpjB-5jb1A:
18.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OR0_A_NPSA603_1
(SERUM ALBUMIN)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		5 / 11 LEU A 373
SER A  39
TRP A 448
LEU A 331
LEU A 452
 None
 1.40A 4or0A-5jb1A:
undetectable		 4or0A-5jb1A:
22.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QZT_A_ACTA202_0
(RETINOL-BINDING
PROTEIN 2)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		4 / 6 TYR A  70
GLU A 253
THR A 154
LEU A 156
 None
 1.42A 4qztA-5jb1A:
undetectable		 4qztA-5jb1A:
13.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M78_A_SALA304_1
(CARBONIC ANHYDRASE 2)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		4 / 7 VAL A 333
PHE A 371
THR A 336
THR A 337
 None
 0.94A 5m78A-5jb1A:
undetectable		 5m78A-5jb1A:
12.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_A_ACTA305_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)		 5jb1 MAJOR CAPSID PROTEIN
L1
(Alphapapillomavi
rus
7) 		3 / 3 THR A 170
MET A 208
HIS A 168
 None
 0.84A 5uunA-5jb1A:
undetectable		 5uunA-5jb1A:
20.40