SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5jbh'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V0M_D_KLND1498_1
(CYTOCHROME P450 3A4)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
5 / 11 ILE H 111
PHE H 108
ALA H 107
ARG H 163
LEU H  67
None
None
None
U  21336 ( 4.4A)
None
1.19A 2v0mD-5jbhH:
undetectable
2v0mD-5jbhH:
18.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZM7_A_ACAA501_1
(6-AMINOHEXANOATE-DIM
ER HYDROLASE)
5jbh 30S RIBOSOMAL
PROTEIN ES24

(Pyrococcus
abyssi)
4 / 7 TYR V  59
ILE V  23
ILE V  64
HIS V  25
U  2 572 ( 4.5A)
None
None
None
1.05A 2zm7A-5jbhV:
undetectable
2zm7A-5jbhV:
12.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NXU_A_RITA600_1
(CYTOCHROME P450 3A4)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
5 / 12 ILE H 111
PHE H 108
ALA H 107
ILE H  71
ALA H 166
None
1.02A 3nxuA-5jbhH:
undetectable
3nxuA-5jbhH:
18.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NXU_B_RITB600_1
(CYTOCHROME P450 3A4)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
5 / 12 ILE H 111
PHE H 108
ALA H 107
ILE H  71
ALA H 166
None
1.03A 3nxuB-5jbhH:
undetectable
3nxuB-5jbhH:
18.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K7A_A_MXDA1002_1
(ANDROGEN RECEPTOR)
5jbh 30S RIBOSOMAL
PROTEIN ES27

(Pyrococcus
abyssi)
3 / 3 GLU Y  47
TRP Y  38
LYS Y  42
None
None
G  2 986 ( 4.6A)
1.39A 4k7aA-5jbhY:
undetectable
4k7aA-5jbhY:
10.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K7A_A_MXDA1002_1
(ANDROGEN RECEPTOR)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
3 / 3 GLU H 128
TRP H 125
LYS H  34
None
1.04A 4k7aA-5jbhH:
undetectable
4k7aA-5jbhH:
21.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MX0_A_BCZA513_1
(NEURAMINIDASE)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
3 / 3 ARG H 157
ASP H  30
ARG H 133
None
0.92A 4mx0A-5jbhH:
undetectable
4mx0A-5jbhH:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JMN_A_FUAA1101_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
4 / 5 ILE H 188
LYS H  70
ILE H  71
VAL H 104
None
U  21336 ( 4.1A)
None
None
0.80A 5jmnA-5jbhH:
undetectable
5jmnA-5jbhH:
11.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5V02_R_657R201_0
(CALMODULIN-1
SMALL CONDUCTANCE
CALCIUM-ACTIVATED
POTASSIUM CHANNEL
PROTEIN 2)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
5 / 10 ALA H 126
LEU H 123
VAL H 122
LEU H  67
GLU H 187
None
1.08A 5v02B-5jbhH:
undetectable
5v02R-5jbhH:
undetectable
5v02B-5jbhH:
21.40
5v02R-5jbhH:
20.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VC0_A_RITA602_1
(CYTOCHROME P450 3A4)
5jbh 30S RIBOSOMAL
PROTEIN US7

(Pyrococcus
abyssi)
5 / 12 ILE H 111
PHE H 108
ALA H 107
ILE H  71
ALA H 166
None
1.03A 5vc0A-5jbhH:
undetectable
5vc0A-5jbhH:
18.60