SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5jwb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1A7Y_B_DVAB8_0
(ACTINOMYCIN D)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
3 / 3 THR A 394
THR A 392
PRO A 396
None
0.83A 1a7yB-5jwbA:
undetectable
1a7yB-5jwbA:
3.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PXX_B_DIFB1701_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 9 LEU A 305
VAL A 205
GLY A 207
ALA A 308
SER A 309
None
None
NAD  A 608 (-3.3A)
NAD  A 608 ( 4.9A)
NAD  A 608 (-4.7A)
1.21A 1pxxB-5jwbA:
undetectable
1pxxB-5jwbA:
21.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PXX_D_DIFD3701_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 10 LEU A 305
VAL A 205
GLY A 207
ALA A 308
SER A 309
None
None
NAD  A 608 (-3.3A)
NAD  A 608 ( 4.9A)
NAD  A 608 (-4.7A)
1.21A 1pxxD-5jwbA:
undetectable
1pxxD-5jwbA:
21.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QFI_B_DVAB8_0
(ACTINOMYCIN X2)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
3 / 3 THR A 394
THR A 392
PRO A 396
None
0.79A 1qfiB-5jwbA:
undetectable
1qfiB-5jwbA:
3.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DG4_A_RAPA501_1
(FK506-BINDING
PROTEIN 1A)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 11 PHE A 531
ILE A 223
PHE A 222
ILE A 234
PHE A 180
None
ACT  A 610 ( 4.5A)
None
None
None
1.16A 2dg4A-5jwbA:
undetectable
2dg4A-5jwbA:
12.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OA1_B_ADNB2005_1
(TRYPTOPHAN
HALOGENASE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 7 GLY A 207
GLY A 208
VAL A 278
SER A 309
NAD  A 608 (-3.3A)
NAD  A 608 ( 4.8A)
NAD  A 608 (-4.2A)
NAD  A 608 (-4.7A)
0.48A 2oa1B-5jwbA:
9.8
2oa1B-5jwbA:
22.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OAX_D_SNLD4001_2
(MINERALOCORTICOID
RECEPTOR)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 5 LEU A 181
LEU A 304
CYH A 187
THR A 188
None
None
None
ACT  A 611 ( 4.4A)
1.30A 2oaxD-5jwbA:
undetectable
2oaxD-5jwbA:
18.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q6K_A_ADNA699_1
(CHLORINASE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 7 PHE A 465
PRO A 432
THR A 433
TRP A 469
None
1.37A 2q6kA-5jwbA:
undetectable
2q6kA-5jwbA:
18.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q6O_B_SAMB500_0
(HYPOTHETICAL PROTEIN)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 6 PHE A 465
PRO A 432
THR A 433
TRP A 469
None
1.37A 2q6oB-5jwbA:
undetectable
2q6oB-5jwbA:
18.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QO5_A_CHDA131_0
(LIVER-BASIC FATTY
ACID BINDING PROTEIN)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 12 ILE A 344
ILE A 317
LEU A 333
CYH A 355
LEU A 144
None
None
None
MG  A 602 (-3.2A)
None
1.18A 2qo5A-5jwbA:
undetectable
2qo5A-5jwbA:
13.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WEK_A_DIFA1373_1
(ZINC-BINDING ALCOHOL
DEHYDROGENASE
DOMAIN-CONTAINING
PROTEIN 2)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 8 ASN A  92
SER A 513
PHE A 101
ASN A 100
None
1.11A 2wekA-5jwbA:
2.1
2wekA-5jwbA:
19.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WEK_B_DIFB1373_1
(ZINC-BINDING ALCOHOL
DEHYDROGENASE
DOMAIN-CONTAINING
PROTEIN 2)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 8 ASN A  92
SER A 513
PHE A 101
ASN A 100
None
1.13A 2wekB-5jwbA:
2.5
2wekB-5jwbA:
19.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ADS_A_IMNA2_2
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 6 ILE A 317
ILE A  44
TYR A 141
LEU A 321
None
1.00A 3adsA-5jwbA:
undetectable
3adsA-5jwbA:
20.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KKZ_B_SAMB302_0
(UNCHARACTERIZED
PROTEIN Q5LES9)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 12 GLY A  49
GLY A 353
GLY A 149
LEU A 311
ALA A 439
FAD  A 601 (-3.1A)
FAD  A 601 ( 3.3A)
MG  A 602 (-3.2A)
None
FAD  A 601 (-3.6A)
1.06A 3kkzB-5jwbA:
2.7
3kkzB-5jwbA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LM8_B_VIBB223_1
(THIAMINE
PYROPHOSPHOKINASE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 7 LEU A 139
LEU A 115
CYH A 129
ASN A 128
None
0.97A 3lm8B-5jwbA:
undetectable
3lm8D-5jwbA:
undetectable
3lm8B-5jwbA:
19.76
3lm8D-5jwbA:
19.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V4T_D_ACTD502_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
3 / 3 GLY A 246
THR A 274
ASN A 248
None
0.72A 3v4tD-5jwbA:
undetectable
3v4tD-5jwbA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_E_W9TE506_1
(HEMOLYTIC LECTIN
CEL-III)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 6 THR A 435
ASN A 438
GLY A 353
ASP A 354
FAD  A 601 (-3.6A)
None
FAD  A 601 ( 3.3A)
FAD  A 601 (-2.9A)
1.24A 3w9tE-5jwbA:
undetectable
3w9tE-5jwbA:
21.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZOS_A_0LIA1000_2
(EPITHELIAL DISCOIDIN
DOMAIN-CONTAINING
RECEPTOR 1)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 9 ILE A  69
LEU A  46
ILE A 146
ILE A 145
ILE A 349
None
FAD  A 601 ( 4.4A)
None
None
None
1.01A 3zosA-5jwbA:
undetectable
3zosA-5jwbA:
20.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EM2_A_SALA503_1
(UNCHARACTERIZED
HTH-TYPE
TRANSCRIPTIONAL
REGULATOR SAR2349)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 6 ILE A 454
VAL A 449
LYS A 338
LEU A 446
None
1.11A 4em2A-5jwbA:
undetectable
4em2A-5jwbA:
17.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GKH_K_KANK301_1
(AMINOGLYCOSIDE
3'-PHOSPHOTRANSFERAS
E APHA1-IAB)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 8 ASP A 336
ASP A 426
GLU A 337
GLU A 365
None
1.12A 4gkhC-5jwbA:
undetectable
4gkhK-5jwbA:
undetectable
4gkhC-5jwbA:
19.13
4gkhK-5jwbA:
19.13
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JWA_A_ACTA609_0
(NADH DEHYDROGENASE,
PUTATIVE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
3 / 3 VAL A 481
SER A 497
TRP A 500
None
CXS  A 614 ( 4.8A)
CXS  A 614 (-3.8A)
0.12A 5jwaA-5jwbA:
56.9
5jwaA-5jwbA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JWA_A_ACTA610_0
(NADH DEHYDROGENASE,
PUTATIVE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 4 ASP A 221
LYS A 225
HIS A 479
ARG A 529
CXS  A 614 (-3.7A)
CXS  A 614 (-2.4A)
CXS  A 614 (-3.6A)
CXS  A 614 (-2.3A)
0.47A 5jwaA-5jwbA:
56.9
5jwaA-5jwbA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JWA_A_ACTA613_0
(NADH DEHYDROGENASE,
PUTATIVE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 4 ASP A 520
LYS A 523
THR A 524
PRO A 530
ACT  A 612 (-3.3A)
ACT  A 612 (-3.7A)
ACT  A 612 (-4.5A)
None
0.21A 5jwaA-5jwbA:
56.9
5jwaA-5jwbA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JWA_H_ACTH610_0
(NADH DEHYDROGENASE,
PUTATIVE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
4 / 4 ASP A 221
LYS A 225
HIS A 479
ARG A 529
CXS  A 614 (-3.7A)
CXS  A 614 (-2.4A)
CXS  A 614 (-3.6A)
CXS  A 614 (-2.3A)
0.57A 5jwaH-5jwbA:
56.9
5jwaH-5jwbA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JWA_H_ACTH614_0
(NADH DEHYDROGENASE,
PUTATIVE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
6 / 6 ILE A 157
VAL A 206
TYR A 277
VAL A 278
TRP A 307
SER A 309
None
NAD  A 608 (-4.8A)
None
NAD  A 608 (-4.2A)
None
NAD  A 608 (-4.7A)
1.46A 5jwaH-5jwbA:
56.9
5jwaH-5jwbA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MUG_A_VIVA301_1
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
3 / 3 SER A 241
SER A 239
PHE A 286
None
0.90A 5mugA-5jwbA:
undetectable
5mugA-5jwbA:
18.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DGX_A_017A101_1
(PROTEASE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 12 LEU A 268
VAL A 272
GLY A 212
LEU A 273
ILE A 270
None
1.06A 6dgxB-5jwbA:
undetectable
6dgxB-5jwbA:
11.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DH6_A_017A104_1
(PROTEASE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 12 LEU A 268
VAL A 272
GLY A 212
LEU A 273
ILE A 270
None
1.07A 6dh6B-5jwbA:
undetectable
6dh6B-5jwbA:
11.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DH6_A_017A104_1
(PROTEASE)
5jwb TYPE II
NADH:UBIQUINONE
OXIDOREDUCTASE

(Plasmodium
falciparum)
5 / 12 VAL A 203
ILE A 306
GLY A 212
LEU A 304
ILE A 240
None
1.05A 6dh6B-5jwbA:
undetectable
6dh6B-5jwbA:
11.40