SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5k1u'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BX4_A_ADNA355_1
(PROTEIN (ADENOSINE
KINASE))
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 GLY A 178
VAL A 171
ILE A 181
GLY A 227
ILE A 222
None
0.92A 1bx4A-5k1uA:
undetectable
1bx4A-5k1uA:
22.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DLS_A_MTXA188_1
(DIHYDROFOLATE
REDUCTASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 ILE A 226
ALA A 167
SER A  64
ILE A  63
PRO A  33
None
None
None
None
FMN  A 400 (-3.7A)
1.06A 1dlsA-5k1uA:
undetectable
1dlsA-5k1uA:
18.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1H4O_A_BEZA1162_0
(PEROXIREDOXIN 5)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 10 THR A  67
PRO A  80
GLY A  81
PHE A 176
GLY A  90
None
1.27A 1h4oA-5k1uA:
undetectable
1h4oB-5k1uA:
undetectable
1h4oA-5k1uA:
18.11
1h4oB-5k1uA:
18.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1H4O_C_BEZC1162_0
(PEROXIREDOXIN 5)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 9 THR A  67
PRO A  80
GLY A  81
PHE A 176
GLY A  90
None
1.25A 1h4oC-5k1uA:
undetectable
1h4oD-5k1uA:
undetectable
1h4oC-5k1uA:
18.11
1h4oD-5k1uA:
18.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1H4O_E_BEZE1162_0
(PEROXIREDOXIN 5)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 9 THR A  67
PRO A  80
GLY A  81
PHE A 176
GLY A  90
None
1.24A 1h4oE-5k1uA:
undetectable
1h4oF-5k1uA:
undetectable
1h4oE-5k1uA:
18.11
1h4oF-5k1uA:
18.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WOP_A_FFOA2887_1
(AMINOMETHYLTRANSFERA
SE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
3 / 3 ASP A  40
GLU A  65
ARG A 140
None
0.88A 1wopA-5k1uA:
undetectable
1wopA-5k1uA:
22.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2G72_B_SAMB2002_0
(PHENYLETHANOLAMINE
N-METHYLTRANSFERASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 TYR A  52
GLN A 108
ILE A 105
VAL A  94
ALA A  66
None
FMN  A 400 (-3.0A)
None
None
TNF  A 401 ( 2.9A)
1.25A 2g72B-5k1uA:
undetectable
2g72B-5k1uA:
20.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VL2_A_BEZA1162_0
(PEROXIREDOXIN-5)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 10 THR A  67
PRO A  80
GLY A  81
PHE A 176
GLY A  90
None
1.20A 2vl2A-5k1uA:
undetectable
2vl2C-5k1uA:
undetectable
2vl2A-5k1uA:
20.24
2vl2C-5k1uA:
20.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X7H_A_PFNA1375_1
(ZINC-BINDING ALCOHOL
DEHYDROGENASE
DOMAIN-CONTAINING
PROTEIN 2)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 5 SER A 236
PHE A 253
VAL A 290
TYR A 240
None
None
None
TNF  A 402 (-4.5A)
1.42A 2x7hA-5k1uA:
undetectable
2x7hA-5k1uA:
22.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X7H_B_PFNB1372_1
(ZINC-BINDING ALCOHOL
DEHYDROGENASE
DOMAIN-CONTAINING
PROTEIN 2)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 5 SER A 236
PHE A 253
VAL A 290
TYR A 240
None
None
None
TNF  A 402 (-4.5A)
1.41A 2x7hB-5k1uA:
undetectable
2x7hB-5k1uA:
22.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZIF_B_SAMB298_0
(PUTATIVE
MODIFICATION
METHYLASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 ALA A 131
ALA A  73
PHE A 121
GLY A 113
THR A 112
None
1.10A 2zifB-5k1uA:
2.7
2zifB-5k1uA:
22.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AF0_A_PAUA314_0
(PANTOTHENATE KINASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 8 VAL A 152
ASP A  72
GLY A 113
TYR A 164
None
0.94A 3af0A-5k1uA:
undetectable
3af0A-5k1uA:
21.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E23_A_SAMA221_1
(UNCHARACTERIZED
PROTEIN RPA2492)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
3 / 3 TYR A 240
ASP A 190
HIS A 269
TNF  A 402 (-4.5A)
None
None
0.91A 3e23A-5k1uA:
undetectable
3e23A-5k1uA:
24.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KM6_A_EAAA222_1
(GLUTATHIONE
S-TRANSFERASE P)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 10 VAL A 179
GLY A 178
VAL A 219
ILE A  23
GLY A 232
None
1.33A 3km6A-5k1uA:
undetectable
3km6A-5k1uA:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OSH_A_OINA5811_1
(PHOSPHOLIPASE A2
ISOFORM 3)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 9 LEU A 282
PHE A 253
ILE A 235
HIS A 194
TYR A 281
None
1.40A 3oshA-5k1uA:
undetectable
3oshA-5k1uA:
16.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3UPW_A_NCAA412_0
(OLD YELLOW ENZYME
2.6 (OYE2.6), NADPH
DEHYDROGENASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 9 THR A  35
ALA A  66
HIS A 182
TYR A 187
PHE A 241
TNF  A 401 ( 3.4A)
TNF  A 401 ( 2.9A)
TNF  A 401 ( 3.5A)
TNF  A 401 (-3.6A)
TNF  A 401 (-3.3A)
0.18A 3upwA-5k1uA:
43.2
3upwA-5k1uA:
34.55
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A3U_A_ACTA1358_0
(NADH:FLAVIN
OXIDOREDUCTASE/NADH
OXIDASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 9 ALA A  32
PRO A  33
ILE A  63
ARG A 234
VAL A 299
FMN  A 400 (-3.5A)
FMN  A 400 (-3.7A)
None
FMN  A 400 (-2.9A)
None
0.58A 4a3uA-5k1uA:
49.3
4a3uA-5k1uA:
38.99
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A3U_A_NCAA1359_0
(NADH:FLAVIN
OXIDOREDUCTASE/NADH
OXIDASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 7 THR A  35
TRP A 110
HIS A 182
ASN A 185
TYR A 187
TNF  A 401 ( 3.4A)
TNF  A 401 (-3.5A)
TNF  A 401 ( 3.5A)
TNF  A 401 ( 3.0A)
TNF  A 401 (-3.6A)
0.33A 4a3uA-5k1uA:
49.3
4a3uA-5k1uA:
38.99
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A3U_B_ACTB1358_0
(NADH:FLAVIN
OXIDOREDUCTASE/NADH
OXIDASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 7 PRO A  33
ILE A  63
ARG A 234
VAL A 299
FMN  A 400 (-3.7A)
None
FMN  A 400 (-2.9A)
None
0.61A 4a3uB-5k1uA:
49.4
4a3uB-5k1uA:
38.99
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A3U_B_NCAB1359_0
(NADH:FLAVIN
OXIDOREDUCTASE/NADH
OXIDASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 7 THR A  35
TRP A 110
HIS A 182
ASN A 185
TYR A 187
TNF  A 401 ( 3.4A)
TNF  A 401 (-3.5A)
TNF  A 401 ( 3.5A)
TNF  A 401 ( 3.0A)
TNF  A 401 (-3.6A)
0.30A 4a3uB-5k1uA:
49.4
4a3uB-5k1uA:
38.99
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4AWU_A_4CHA502_0
(OXIDOREDUCTASE,
FMN-BINDING)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 7 THR A  35
TRP A 110
HIS A 182
ASN A 185
TYR A 187
TNF  A 401 ( 3.4A)
TNF  A 401 (-3.5A)
TNF  A 401 ( 3.5A)
TNF  A 401 ( 3.0A)
TNF  A 401 (-3.6A)
0.40A 4awuA-5k1uA:
49.2
4awuA-5k1uA:
41.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4DF2_A_4CHA506_0
(NADPH DEHYDROGENASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 6 THR A  35
TYR A  76
HIS A 182
TYR A 187
TNF  A 401 ( 3.4A)
None
TNF  A 401 ( 3.5A)
TNF  A 401 (-3.6A)
0.79A 4df2A-5k1uA:
43.2
4df2A-5k1uA:
34.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G0U_F_ASWF101_1
(DNA TOPOISOMERASE
2-BETA)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 6 PRO A  33
ARG A 234
GLY A 183
ALA A  66
FMN  A 400 (-3.7A)
FMN  A 400 (-2.9A)
None
TNF  A 401 ( 2.9A)
0.97A 4g0uA-5k1uA:
undetectable
4g0uA-5k1uA:
19.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GH8_B_MTXB201_1
(DIHYDROFOLATE
REDUCTASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 ILE A 226
ALA A 167
SER A  64
ILE A  63
PRO A  33
None
None
None
None
FMN  A 400 (-3.7A)
1.12A 4gh8B-5k1uA:
undetectable
4gh8B-5k1uA:
18.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JX1_E_CAME502_0
(CAMPHOR
5-MONOOXYGENASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 5 TYR A 240
THR A 285
PHE A 279
ILE A 270
TNF  A 402 (-4.5A)
None
None
None
1.14A 4jx1E-5k1uA:
undetectable
4jx1E-5k1uA:
23.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LHM_A_AZZA510_1
(THYMIDINE
PHOSPHORYLASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 11 LEU A 188
TYR A 164
VAL A 218
PHE A 192
LEU A 256
None
1.44A 4lhmA-5k1uA:
undetectable
4lhmA-5k1uA:
21.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z3O_F_MFXF101_1
(DNA TOPOISOMERASE 4
SUBUNIT
B,PARE30-PARC55
FUSED TOPO IV FROM
S. PNEUMONIAE
E-SITE DNA)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 5 ARG A 234
GLY A 183
GLU A 180
SER A 197
FMN  A 400 (-2.9A)
None
None
None
1.16A 4z3oA-5k1uA:
undetectable
4z3oB-5k1uA:
undetectable
4z3oA-5k1uA:
20.24
4z3oB-5k1uA:
20.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z4E_A_IPHA904_0
(PROTEIN ARGONAUTE-2)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 7 ILE A  88
GLN A  87
PRO A  45
ASP A  40
None
1.09A 4z4eA-5k1uA:
undetectable
4z4eA-5k1uA:
18.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZXI_A_GLYA1402_0
(TYROCIDINE
SYNTHETASE 3)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 7 ASP A 275
ILE A 272
GLY A 238
THR A 285
None
1.15A 4zxiA-5k1uA:
undetectable
4zxiA-5k1uA:
15.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HWA_A_GCSA302_1
(CHITOSANASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 7 ASP A 249
TYR A 281
GLY A 238
TYR A 240
None
None
None
TNF  A 402 (-4.5A)
1.09A 5hwaA-5k1uA:
undetectable
5hwaA-5k1uA:
22.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IEN_B_VDYB201_1
(CDL2.2)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 10 PRO A 326
LEU A 343
VAL A  10
ILE A  29
LEU A  13
None
1.15A 5ienB-5k1uA:
undetectable
5ienB-5k1uA:
18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5J7W_D_MTXD402_1
(THYMIDYLATE SYNTHASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 ILE A 105
LEU A  25
GLY A 178
PHE A 176
ILE A  63
None
0.99A 5j7wD-5k1uA:
undetectable
5j7wD-5k1uA:
21.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M0O_C_EPAC502_1
(TERMINAL
OLEFIN-FORMING FATTY
ACID DECARBOXYLASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 8 LEU A  43
ILE A  68
PRO A  71
ALA A  73
None
1.00A 5m0oC-5k1uA:
undetectable
5m0oC-5k1uA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_B_ACTB306_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
4 / 4 LEU A 282
GLY A 284
SER A 288
SER A 287
None
1.23A 5uunB-5k1uA:
undetectable
5uunB-5k1uA:
22.31
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5V4V_A_NCAA402_0
(NADPH DEHYDROGENASE
3)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
6 / 8 THR A  35
TRP A 110
HIS A 182
ASN A 185
TYR A 187
PHE A 241
TNF  A 401 ( 3.4A)
TNF  A 401 (-3.5A)
TNF  A 401 ( 3.5A)
TNF  A 401 ( 3.0A)
TNF  A 401 (-3.6A)
TNF  A 401 (-3.3A)
0.34A 5v4vA-5k1uA:
44.7
5v4vA-5k1uA:
36.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5V4V_B_NCAB402_0
(NADPH DEHYDROGENASE
3)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
6 / 8 THR A  35
TRP A 110
HIS A 182
ASN A 185
TYR A 187
PHE A 241
TNF  A 401 ( 3.4A)
TNF  A 401 (-3.5A)
TNF  A 401 ( 3.5A)
TNF  A 401 ( 3.0A)
TNF  A 401 (-3.6A)
TNF  A 401 (-3.3A)
0.32A 5v4vB-5k1uA:
44.7
5v4vB-5k1uA:
36.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XXI_A_LSNA503_1
(CYTOCHROME P450 2C9)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 ILE A  23
PHE A 106
LEU A 298
THR A 297
LEU A  19
None
1.12A 5xxiA-5k1uA:
undetectable
5xxiA-5k1uA:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6QXS_B_FOZB403_0
(THYMIDYLATE SYNTHASE)
5k1u NAD(P)H:FLAVIN
OXIDOREDUCTASE SYE4

(Shewanella
oneidensis)
5 / 12 ILE A 105
LEU A  25
GLY A 178
PHE A 176
ILE A  63
None
1.04A 6qxsB-5k1uA:
undetectable
6qxsB-5k1uA:
21.31