SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5kaq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BDW_B_DVAB6_0
(GRAMICIDIN A)		 5kaq ANTIBODY 31.A.83 FAB
HEAVY CHAIN
(Homo
sapiens) 		3 / 3 TRP F  36
ALA F  50
VAL F  48
 None
 0.90A 1bdwA-5kaqF:
undetectable
1bdwB-5kaqF:
undetectable		 1bdwA-5kaqF:
5.06
1bdwB-5kaqF:
5.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DRZ_A_H8JA1206_0
(5HT2B RECEPTOR, BRIL
CHIMERA)		 5kaq ANTIBODY 31.A.83 FAB
HEAVY CHAIN
(Homo
sapiens) 		5 / 12 VAL F 225
THR F 223
VAL F 229
GLY F 136
VAL F 170
 None
 0.94A 6drzA-5kaqF:
undetectable		 6drzA-5kaqF:
18.25