SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ks7'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FSL_B_NIOB145_1
(LEGHEMOGLOBIN A)		 5ks7 CARNITINE TRANSPORT
ATP-BINDING PROTEIN
OPUCA
(Listeria
monocytogenes) 		4 / 8 PHE A 320
TYR A 340
ILE A 343
VAL A 322
 None
 0.88A 1fslB-5ks7A:
undetectable		 1fslB-5ks7A:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UPF_A_URFA999_1
(URACIL
PHOSPHORIBOSYLTRANSF
ERASE)		 5ks7 CARNITINE TRANSPORT
ATP-BINDING PROTEIN
OPUCA
(Listeria
monocytogenes) 		4 / 5 MET A 275
ALA A 271
ILE A 272
ASP A 297
 None
 1.22A 1upfA-5ks7A:
undetectable		 1upfA-5ks7A:
20.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R55_A_PZAA598_0
(LACTOPEROXIDASE)		 5ks7 CARNITINE TRANSPORT
ATP-BINDING PROTEIN
OPUCA
(Listeria
monocytogenes) 		3 / 3 GLU A 316
PHE A 295
GLN A 300
 None
 0.81A 3r55A-5ks7A:
undetectable		 3r55A-5ks7A:
12.16