SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ksh'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EPB_B_9CRB165_2
(EPIDIDYMAL RETINOIC
ACID-BINDING PROTEIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
4 / 8 ALA A 522
PHE A 492
VAL A 494
VAL A 489
None
0.84A 1epbB-5kshA:
undetectable
1epbB-5kshA:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_A_CFXA1300_1
(BETA-LACTAMASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
6 / 12 SER A 310
LYS A 313
SER A 362
ASN A 364
THR A 483
GLY A 499
None
0.80A 1i2wA-5kshA:
15.5
1i2wA-5kshA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_A_CFXA1300_1
(BETA-LACTAMASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
6 / 12 SER A 310
LYS A 313
SER A 362
ASN A 364
THR A 483
LYS A 497
None
0.94A 1i2wA-5kshA:
15.5
1i2wA-5kshA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_B_CFXB2300_1
(BETA-LACTAMASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
6 / 12 SER A 310
LYS A 313
SER A 362
ASN A 364
THR A 483
GLY A 499
None
0.79A 1i2wB-5kshA:
15.6
1i2wB-5kshA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_A_SAMA293_0
(GLYCINE
N-METHYLTRANSFERASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 ILE A 179
GLY A  76
VAL A  78
ALA A  73
TYR A 169
None
1.35A 1nbhA-5kshA:
undetectable
1nbhA-5kshA:
19.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_C_SAMC2293_0
(GLYCINE
N-METHYLTRANSFERASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 ILE A 179
GLY A  76
VAL A  78
ALA A  73
TYR A 169
None
1.34A 1nbhC-5kshA:
undetectable
1nbhC-5kshA:
19.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_D_SAMD3293_0
(GLYCINE
N-METHYLTRANSFERASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 ILE A 179
GLY A  76
VAL A  78
ALA A  73
TYR A 169
None
1.35A 1nbhD-5kshA:
undetectable
1nbhD-5kshA:
19.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VE3_B_REAB1445_1
(PUTATIVE CYTOCHROME
P450 120)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 ALA A 318
ALA A 437
THR A 436
GLY A 520
PRO A 527
None
1.07A 2ve3B-5kshA:
undetectable
2ve3B-5kshA:
22.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7H_B_SAMB530_1
(TYPE I RESTRICTION
ENZYME ECOKI M
PROTEIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
3 / 3 TYR A 284
GLU A 190
THR A 303
None
GOL  A 601 (-4.3A)
GOL  A 601 ( 4.2A)
0.78A 2y7hB-5kshA:
undetectable
2y7hB-5kshA:
23.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7H_B_SAMB530_1
(TYPE I RESTRICTION
ENZYME ECOKI M
PROTEIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
3 / 3 TYR A 509
GLU A 307
THR A 417
None
1.05A 2y7hB-5kshA:
undetectable
2y7hB-5kshA:
23.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CFL_A_5CHA693_1
(LACTOTRANSFERRIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
4 / 4 THR A 539
VAL A 548
GLY A 263
THR A 264
None
0.87A 3cflA-5kshA:
undetectable
3cflA-5kshA:
21.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DH0_A_SAMA220_0
(SAM DEPENDENT
METHYLTRANSFERASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 PHE A 518
VAL A 515
GLY A 516
GLY A 499
THR A 534
None
1.30A 3dh0A-5kshA:
undetectable
3dh0A-5kshA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DH0_A_SAMA220_0
(SAM DEPENDENT
METHYLTRANSFERASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 PHE A 518
VAL A 515
GLY A 516
GLY A 545
THR A 534
None
1.33A 3dh0A-5kshA:
undetectable
3dh0A-5kshA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E22_B_LOCB700_2
(TUBULIN BETA-2B
CHAIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 LEU A 386
ALA A 434
LEU A 438
ALA A 318
LYS A 319
None
1.18A 3e22B-5kshA:
undetectable
3e22B-5kshA:
22.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E22_D_LOCD700_2
(TUBULIN BETA-2B
CHAIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 LEU A 386
ALA A 434
LEU A 438
ALA A 318
LYS A 319
None
1.21A 3e22D-5kshA:
undetectable
3e22D-5kshA:
22.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IB2_A_IBPA3960_1
(LACTOTRANSFERRIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
4 / 4 GLY A 516
VAL A 548
GLY A 484
THR A 485
None
0.87A 3ib2A-5kshA:
undetectable
3ib2A-5kshA:
21.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_C_TFPC202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 PHE A 420
ASP A 346
SER A 363
SER A 368
ILE A 413
None
1.19A 3ko0A-5kshA:
undetectable
3ko0B-5kshA:
undetectable
3ko0C-5kshA:
undetectable
3ko0D-5kshA:
undetectable
3ko0A-5kshA:
10.70
3ko0B-5kshA:
10.70
3ko0C-5kshA:
10.70
3ko0D-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_D_TFPD202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 SER A 368
ILE A 413
PHE A 420
ASP A 346
SER A 363
None
1.22A 3ko0C-5kshA:
undetectable
3ko0D-5kshA:
undetectable
3ko0E-5kshA:
undetectable
3ko0F-5kshA:
undetectable
3ko0C-5kshA:
10.70
3ko0D-5kshA:
10.70
3ko0E-5kshA:
10.70
3ko0F-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_E_TFPE202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 ASP A 346
SER A 363
PHE A 420
SER A 368
ILE A 413
None
1.17A 3ko0C-5kshA:
undetectable
3ko0D-5kshA:
undetectable
3ko0E-5kshA:
undetectable
3ko0F-5kshA:
undetectable
3ko0C-5kshA:
10.70
3ko0D-5kshA:
10.70
3ko0E-5kshA:
10.70
3ko0F-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_F_TFPF202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 SER A 368
ILE A 413
PHE A 420
ASP A 346
SER A 363
None
1.26A 3ko0E-5kshA:
undetectable
3ko0F-5kshA:
undetectable
3ko0G-5kshA:
undetectable
3ko0H-5kshA:
undetectable
3ko0E-5kshA:
10.70
3ko0F-5kshA:
10.70
3ko0G-5kshA:
10.70
3ko0H-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_G_TFPG202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 10 ASP A 346
SER A 363
PHE A 420
SER A 368
ILE A 413
None
1.19A 3ko0E-5kshA:
0.0
3ko0F-5kshA:
undetectable
3ko0G-5kshA:
0.0
3ko0H-5kshA:
undetectable
3ko0E-5kshA:
10.70
3ko0F-5kshA:
10.70
3ko0G-5kshA:
10.70
3ko0H-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_H_TFPH202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 SER A 368
ILE A 413
PHE A 420
ASP A 346
SER A 363
None
1.23A 3ko0G-5kshA:
undetectable
3ko0H-5kshA:
undetectable
3ko0I-5kshA:
undetectable
3ko0J-5kshA:
undetectable
3ko0G-5kshA:
10.70
3ko0H-5kshA:
10.70
3ko0I-5kshA:
10.70
3ko0J-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_I_TFPI202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 ASP A 346
SER A 363
PHE A 420
SER A 368
ILE A 413
None
1.19A 3ko0G-5kshA:
undetectable
3ko0H-5kshA:
undetectable
3ko0I-5kshA:
undetectable
3ko0J-5kshA:
undetectable
3ko0G-5kshA:
10.70
3ko0H-5kshA:
10.70
3ko0I-5kshA:
10.70
3ko0J-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_J_TFPJ202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 ASP A 346
SER A 363
PHE A 420
SER A 368
ILE A 413
None
1.27A 3ko0A-5kshA:
undetectable
3ko0B-5kshA:
undetectable
3ko0I-5kshA:
undetectable
3ko0J-5kshA:
undetectable
3ko0A-5kshA:
10.70
3ko0B-5kshA:
10.70
3ko0I-5kshA:
10.70
3ko0J-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_L_TFPL202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 SER A 368
ILE A 413
ASP A 346
SER A 363
PHE A 420
None
1.21A 3ko0K-5kshA:
undetectable
3ko0L-5kshA:
undetectable
3ko0M-5kshA:
undetectable
3ko0N-5kshA:
undetectable
3ko0K-5kshA:
10.70
3ko0L-5kshA:
10.70
3ko0M-5kshA:
10.70
3ko0N-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_M_TFPM202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 SER A 368
ILE A 413
ASP A 346
SER A 363
PHE A 420
None
1.23A 3ko0M-5kshA:
undetectable
3ko0N-5kshA:
undetectable
3ko0O-5kshA:
undetectable
3ko0P-5kshA:
undetectable
3ko0M-5kshA:
10.70
3ko0N-5kshA:
10.70
3ko0O-5kshA:
10.70
3ko0P-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_N_TFPN202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 ASP A 346
SER A 363
PHE A 420
SER A 368
ILE A 413
None
1.22A 3ko0K-5kshA:
undetectable
3ko0L-5kshA:
undetectable
3ko0M-5kshA:
undetectable
3ko0N-5kshA:
undetectable
3ko0K-5kshA:
10.70
3ko0L-5kshA:
10.70
3ko0M-5kshA:
10.70
3ko0N-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_O_TFPO202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 SER A 368
ILE A 413
PHE A 420
ASP A 346
SER A 363
None
1.17A 3ko0O-5kshA:
undetectable
3ko0P-5kshA:
undetectable
3ko0Q-5kshA:
undetectable
3ko0R-5kshA:
undetectable
3ko0O-5kshA:
10.70
3ko0P-5kshA:
10.70
3ko0Q-5kshA:
10.70
3ko0R-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_P_TFPP202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 PHE A 420
ASP A 346
SER A 363
SER A 368
ILE A 413
None
1.20A 3ko0M-5kshA:
undetectable
3ko0N-5kshA:
undetectable
3ko0O-5kshA:
undetectable
3ko0P-5kshA:
undetectable
3ko0M-5kshA:
10.70
3ko0N-5kshA:
10.70
3ko0O-5kshA:
10.70
3ko0P-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_Q_TFPQ202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 10 PHE A 420
ASP A 346
SER A 363
SER A 368
ILE A 413
None
1.18A 3ko0O-5kshA:
undetectable
3ko0P-5kshA:
undetectable
3ko0Q-5kshA:
undetectable
3ko0R-5kshA:
undetectable
3ko0O-5kshA:
10.70
3ko0P-5kshA:
10.70
3ko0Q-5kshA:
10.70
3ko0R-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_R_TFPR202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 SER A 368
ILE A 413
ASP A 346
SER A 363
PHE A 420
None
1.21A 3ko0Q-5kshA:
0.0
3ko0R-5kshA:
undetectable
3ko0S-5kshA:
undetectable
3ko0T-5kshA:
undetectable
3ko0Q-5kshA:
10.70
3ko0R-5kshA:
10.70
3ko0S-5kshA:
10.70
3ko0T-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_T_TFPT202_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 ASP A 346
SER A 363
PHE A 420
SER A 368
ILE A 413
None
1.17A 3ko0Q-5kshA:
undetectable
3ko0R-5kshA:
undetectable
3ko0S-5kshA:
undetectable
3ko0T-5kshA:
undetectable
3ko0Q-5kshA:
10.70
3ko0R-5kshA:
10.70
3ko0S-5kshA:
10.70
3ko0T-5kshA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_C_P77C203_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 10 ASP A 346
SER A 363
PHE A 420
SER A 368
ILE A 413
None
1.24A 3m0wC-5kshA:
undetectable
3m0wD-5kshA:
undetectable
3m0wE-5kshA:
undetectable
3m0wF-5kshA:
undetectable
3m0wC-5kshA:
11.32
3m0wD-5kshA:
11.32
3m0wE-5kshA:
11.32
3m0wF-5kshA:
11.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_F_P77F203_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 9 SER A 368
ILE A 413
PHE A 420
ASP A 346
SER A 363
None
1.24A 3m0wC-5kshA:
undetectable
3m0wD-5kshA:
undetectable
3m0wE-5kshA:
undetectable
3m0wF-5kshA:
undetectable
3m0wC-5kshA:
11.32
3m0wD-5kshA:
11.32
3m0wE-5kshA:
11.32
3m0wF-5kshA:
11.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_H_P77H203_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 10 SER A 368
ILE A 413
PHE A 420
ASP A 346
SER A 363
None
1.22A 3m0wE-5kshA:
undetectable
3m0wF-5kshA:
undetectable
3m0wG-5kshA:
undetectable
3m0wH-5kshA:
undetectable
3m0wE-5kshA:
11.32
3m0wF-5kshA:
11.32
3m0wG-5kshA:
11.32
3m0wH-5kshA:
11.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_I_P77I203_1
(PROTEIN S100-A4)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 10 SER A 368
ILE A 413
ASP A 346
SER A 363
PHE A 420
None
1.22A 3m0wA-5kshA:
undetectable
3m0wB-5kshA:
undetectable
3m0wI-5kshA:
undetectable
3m0wJ-5kshA:
undetectable
3m0wA-5kshA:
11.32
3m0wB-5kshA:
11.32
3m0wI-5kshA:
11.32
3m0wJ-5kshA:
11.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MZE_A_CFXA364_1
(D-ALANYL-D-ALANINE
CARBOXYPEPTIDASE
DACA)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
6 / 12 SER A 310
LYS A 313
ASN A 364
THR A 498
GLY A 499
THR A 501
None
1.04A 3mzeA-5kshA:
5.5
3mzeA-5kshA:
21.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OU7_B_SAMB300_1
(SAM-DEPENDENT
METHYLTRANSFERASE)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
3 / 3 TYR A  54
ASP A 219
ASP A 222
None
0.68A 3ou7B-5kshA:
undetectable
3ou7B-5kshA:
16.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DX5_B_MIYB1103_1
(ACRIFLAVINE
RESISTANCE PROTEIN B)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 PHE A 315
SER A 419
ILE A 317
ALA A 318
VAL A 470
None
1.17A 4dx5B-5kshA:
undetectable
4dx5B-5kshA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4U8V_B_MIYB1103_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 PHE A 315
SER A 419
ILE A 317
ALA A 318
PHE A 462
None
1.13A 4u8vB-5kshA:
undetectable
4u8vB-5kshA:
20.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4U8V_B_MIYB1103_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 PHE A 315
SER A 419
ILE A 317
ALA A 318
VAL A 470
None
1.15A 4u8vB-5kshA:
undetectable
4u8vB-5kshA:
20.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4U8Y_B_MIYB1102_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
6 / 12 PHE A 315
SER A 419
ILE A 317
ALA A 318
PHE A 462
VAL A 470
None
1.28A 4u8yB-5kshA:
undetectable
4u8yB-5kshA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X1I_B_LOCB502_2
(TUBULIN BETA CHAIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 LEU A 386
ALA A 434
LEU A 438
ALA A 318
VAL A 316
None
1.11A 4x1iB-5kshA:
undetectable
4x1iB-5kshA:
22.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IGZ_A_SPRA404_2
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E II)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 9 LEU A 192
ILE A 275
GLU A 274
PHE A 449
GLU A 399
None
1.27A 5igzA-5kshA:
undetectable
5igzA-5kshA:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ITZ_B_LOCB502_1
(TUBULIN BETA-2B
CHAIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 LEU A 447
THR A 534
ALA A 532
ILE A 530
ILE A 519
None
0.82A 5itzB-5kshA:
undetectable
5itzB-5kshA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LF3_H_BO2H306_1
(PROTEASOME SUBUNIT
BETA TYPE-7
PROTEASOME SUBUNIT
BETA TYPE-3)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 10 THR A 264
ALA A 262
GLU A 537
ALA A 301
THR A 303
None
None
None
None
GOL  A 601 ( 4.2A)
1.16A 5lf3H-5kshA:
undetectable
5lf3I-5kshA:
undetectable
5lf3H-5kshA:
18.72
5lf3I-5kshA:
18.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LF3_V_BO2V303_1
(PROTEASOME SUBUNIT
BETA TYPE-7
PROTEASOME SUBUNIT
BETA TYPE-3)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 10 THR A 264
ALA A 262
GLU A 537
ALA A 301
THR A 303
None
None
None
None
GOL  A 601 ( 4.2A)
1.14A 5lf3V-5kshA:
undetectable
5lf3W-5kshA:
undetectable
5lf3V-5kshA:
18.72
5lf3W-5kshA:
18.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LF7_H_6V8H305_0
(PROTEASOME SUBUNIT
BETA TYPE-3
PROTEASOME SUBUNIT
BETA TYPE-7)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 THR A 264
ALA A 262
GLU A 537
ALA A 301
THR A 303
None
None
None
None
GOL  A 601 ( 4.2A)
1.13A 5lf7H-5kshA:
undetectable
5lf7I-5kshA:
undetectable
5lf7H-5kshA:
18.72
5lf7I-5kshA:
18.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LF7_V_6V8V303_0
(PROTEASOME SUBUNIT
BETA TYPE-3
PROTEASOME SUBUNIT
BETA TYPE-7)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 11 THR A 264
ALA A 262
GLU A 537
ALA A 301
THR A 303
None
None
None
None
GOL  A 601 ( 4.2A)
1.12A 5lf7V-5kshA:
undetectable
5lf7W-5kshA:
undetectable
5lf7V-5kshA:
18.72
5lf7W-5kshA:
18.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OJ0_A_9WTA801_0
(PENICILLIN-BINDING
PROTEIN 2X)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 ARG A 345
SER A 362
ASN A 364
THR A 483
GLY A 499
None
1.32A 5oj0A-5kshA:
34.9
5oj0A-5kshA:
27.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XIW_B_LOCB504_2
(TUBULIN BETA CHAIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 LEU A 447
THR A 534
ALA A 532
ILE A 530
ILE A 519
None
0.80A 5xiwB-5kshA:
undetectable
5xiwB-5kshA:
9.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XIW_D_LOCD503_2
(TUBULIN BETA CHAIN)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
5 / 12 LEU A 386
ALA A 434
LEU A 438
ALA A 318
LYS A 319
None
1.22A 5xiwD-5kshA:
undetectable
5xiwD-5kshA:
9.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CDU_D_EY4D500_0
(CHIMERIC ALPHA1GABAA
RECEPTOR)
5ksh PENICILLIN-BINDING
PROTEIN 2

(Neisseria
gonorrhoeae)
4 / 7 ILE A 388
PRO A 308
ALA A 437
THR A 436
None
0.99A 6cduC-5kshA:
undetectable
6cduD-5kshA:
undetectable
6cduC-5kshA:
20.36
6cduD-5kshA:
20.36