SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ljm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1XDK_F_9CRF1600_2
(RETINOIC ACID
RECEPTOR, BETA)		 5ljm SPERMATOGENESIS-ASSO
CIATED PROTEIN 2
(Homo
sapiens) 		3 / 3 LEU A  52
PHE A  11
ARG A  43
 None
 0.73A 1xdkF-5ljmA:
undetectable		 1xdkF-5ljmA:
24.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2LH8_A_VIBA1_1
(MAJOR PRION PROTEIN)		 5ljm SPERMATOGENESIS-ASSO
CIATED PROTEIN 2
(Homo
sapiens) 		4 / 6 PRO A   6
MET A   7
HIS A  53
ASP A 203
 None
 1.19A 2lh8A-5ljmA:
1.5		 2lh8A-5ljmA:
16.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FUK_A_SNPA1236_1
(MROUPO)		 5ljm SPERMATOGENESIS-ASSO
CIATED PROTEIN 2
(Homo
sapiens) 		4 / 7 ILE A 134
THR A 125
SER A  73
LEU A  92
 None
GOL  A 302 ( 4.9A)
None
None
 0.76A 5fukA-5ljmA:
undetectable
5fukB-5ljmA:
undetectable		 5fukA-5ljmA:
17.09
5fukB-5ljmA:
17.09