SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5lmj'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXT_A_MTXA2000_1
(ANTI-METHOTREXATE
CDR1-3 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 12 ALA A  24
MET A  34
ARG A  71
ASN A  76
VAL A  78
ALA A  94
 None
 0.95A 3qxtA-5lmjA:
20.3		 3qxtA-5lmjA:
74.02
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXT_A_MTXA2000_1
(ANTI-METHOTREXATE
CDR1-3 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 12 VAL A   2
ALA A  24
ARG A  71
ASN A  76
VAL A  78
ALA A  94
 None
 0.89A 3qxtA-5lmjA:
20.3		 3qxtA-5lmjA:
74.02
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXT_B_MTXB2000_1
(ANTI-METHOTREXATE
CDR1-3 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		7 / 12 LEU A   4
ALA A  24
MET A  34
ARG A  71
VAL A  78
ALA A  94
TYR A 102
 None
 0.98A 3qxtB-5lmjA:
20.5		 3qxtB-5lmjA:
74.02
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_A_MTXA2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		7 / 12 ALA A  24
MET A  34
ARG A  71
ASN A  73
VAL A  78
ALA A  94
TYR A 102
 None
 0.94A 3qxvA-5lmjA:
20.2		 3qxvA-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_A_MTXA2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		7 / 12 VAL A   2
ALA A  24
ARG A  71
ASN A  73
VAL A  78
ALA A  94
TYR A 102
 None
 0.90A 3qxvA-5lmjA:
20.2		 3qxvA-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_B_MTXB2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 12 ALA A  24
MET A  34
ARG A  71
VAL A  78
ALA A  94
TYR A 102
 None
 0.98A 3qxvB-5lmjA:
20.4		 3qxvB-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_B_MTXB2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 12 VAL A   2
ALA A  24
ARG A  71
VAL A  78
ALA A  94
TYR A 102
 None
 0.81A 3qxvB-5lmjA:
20.4		 3qxvB-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_C_MTXC2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 11 ALA A  24
MET A  34
ARG A  71
ASN A  73
VAL A  78
ALA A  94
 None
 0.93A 3qxvC-5lmjA:
20.4		 3qxvC-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_C_MTXC2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 11 VAL A   2
ALA A  24
ARG A  71
ASN A  73
VAL A  78
ALA A  94
 None
 0.84A 3qxvC-5lmjA:
20.4		 3qxvC-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_D_MTXD2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 12 ALA A  24
MET A  34
ARG A  71
VAL A  78
ALA A  94
TYR A 102
 None
 0.95A 3qxvD-5lmjA:
20.2		 3qxvD-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_D_MTXD2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 12 VAL A   2
ALA A  24
ARG A  71
VAL A  78
ALA A  94
TYR A 102
 None
 0.95A 3qxvD-5lmjA:
20.2		 3qxvD-5lmjA:
73.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3QXV_E_MTXE2000_1
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 5lmj NANOBODY
(Lama
glama) 		6 / 12 ALA A  24
MET A  34
ARG A  71
VAL A  78
ALA A  94
TYR A 102
 None
 0.95A 3qxvE-5lmjA:
16.7		 3qxvE-5lmjA:
73.23