SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5lvt'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B2S_A_ACTA107_0
(CRISPR-ASSOCIATED
ENDONUCLEASE CAS9
GUIDE RNA)		 5lvt DNA-BINDING PROTEIN
HU
(Lactococcus
lactis) 		3 / 3 VAL A  77
THR A  75
ARG A  56
 None
 0.74A 5b2sB-5lvtA:
undetectable		 5b2sB-5lvtA:
5.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B2T_A_ACTA108_0
(CRISPR-ASSOCIATED
ENDONUCLEASE CAS9
GUIDE RNA)		 5lvt DNA-BINDING PROTEIN
HU
(Lactococcus
lactis) 		3 / 3 VAL A  77
THR A  75
ARG A  56
 None
 0.78A 5b2tB-5lvtA:
0.1		 5b2tB-5lvtA:
5.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BQG_A_ERMA1201_2
(5-HYDROXYTRYPTAMINE
RECEPTOR 2C,SOLUBLE
CYTOCHROME B562)		 5lvt DNA-BINDING PROTEIN
HU
(Lactococcus
lactis) 		4 / 5 VAL A  11
THR A  15
VAL A  32
LEU A  45
 None
 0.99A 6bqgA-5lvtA:
undetectable		 6bqgA-5lvtA:
17.39