SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5mdn'
List of Similar Pattern of Amino Acids| DrReposER ID / Desc. | Hit PDBID |
Hit Macromolecule |
Res. Matches |
Interface | HETATM | RMSD | Dali Z-score |
Seq. Identity (%) |
View | Dock | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1AV2_D_DVAD8_0 (GRAMICIDIN A) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | VAL A 133VAL A 150TRP A 152 | None | 0.90A | 1av2C-5mdnA:undetectable1av2D-5mdnA:undetectable | 1av2C-5mdnA:1.801av2D-5mdnA:1.80 | |||
| 1GAH_A_ACRA497_1 (GLUCOAMYLASE-471) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | ARG A 118ASP A 122TYR A 109GLU A 110TRP A 376 | None | 1.50A | 1gahA-5mdnA:undetectable | 1gahA-5mdnA:21.13 | |||
| 1HWI_B_115B1_2 (HMG-COA REDUCTASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 8 | SER A 422SER A 563ASP A 590LYS A 591 | None | 1.26A | 1hwiB-5mdnA:3.1 | 1hwiB-5mdnA:20.28 | |||
| 1J8U_A_H4BA429_1 (PHENYLALANINE-4-HYDROXYLASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 7 | LEU A 341SER A 339LEU A 343ALA A 297 | None | 0.86A | 1j8uA-5mdnA:undetectable | 1j8uA-5mdnA:18.60 | |||
| 1Q97_B_ADNB486_1 (SR PROTEIN KINASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 4 | VAL A 457ALA A 454LEU A 434PHE A 461 | None | 1.16A | 1q97B-5mdnA:undetectable | 1q97B-5mdnA:19.65 | |||
| 1W5U_D_DVAD8_0 (GRAMICIDIN D) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | VAL A 133VAL A 150TRP A 152 | None | 0.85A | 1w5uC-5mdnA:undetectable1w5uD-5mdnA:undetectable | 1w5uC-5mdnA:1.801w5uD-5mdnA:1.80 | |||
| 2IZQ_A_DVAA8_0 (GRAMICIDIN D) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | VAL A 150TRP A 152VAL A 133 | None | 0.82A | 2izqA-5mdnA:undetectable2izqB-5mdnA:undetectable | 2izqA-5mdnA:1.802izqB-5mdnA:1.80 | |||
| 2IZQ_B_DVAB6_0 (GRAMICIDIN D) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | TRP A 237ALA A 274VAL A 270 | None | 0.76A | 2izqA-5mdnA:undetectable2izqB-5mdnA:undetectable | 2izqA-5mdnA:1.802izqB-5mdnA:1.80 | |||
| 2YGN_A_ACTA1181_0 (WNT INHIBITORYFACTOR 1) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | TYR A 230VAL A 282THR A 292 | None | 0.82A | 2ygnA-5mdnA:undetectable | 2ygnA-5mdnA:10.74 | |||
| 3CS8_A_BRLA503_1 (PEROXISOMEPROLIFERATOR-ACTIVATED RECEPTOR GAMMA) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | GLY A 214ILE A 227LEU A 166LEU A 240LEU A 251 | None | 1.26A | 3cs8A-5mdnA:undetectable | 3cs8A-5mdnA:17.25 | |||
| 3K9F_F_LFXF0_1 (DNA TOPOISOMERASE 4SUBUNIT ADNA TOPOISOMERASE 4SUBUNIT B) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 5 | ARG A 164ARG A 29GLY A 28GLU A 27 | None | 1.14A | 3k9fA-5mdnA:undetectable3k9fB-5mdnA:undetectable3k9fC-5mdnA:undetectable | 3k9fA-5mdnA:21.433k9fB-5mdnA:21.433k9fC-5mdnA:16.26 | |||
| 3K9F_H_LFXH0_1 (DNA TOPOISOMERASE 4SUBUNIT ADNA TOPOISOMERASE 4SUBUNIT B) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 6 | ARG A 164ARG A 29GLY A 28GLU A 27 | None | 1.14A | 3k9fA-5mdnA:undetectable3k9fB-5mdnA:undetectable3k9fD-5mdnA:undetectable | 3k9fA-5mdnA:21.433k9fB-5mdnA:21.433k9fD-5mdnA:16.26 | |||
| 3KP2_B_PNNB5002_0 (TRANSCRIPTIONALREGULATOR TCAR) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 5 | ASN A 280ALA A 367ALA A 366ARG A 373 | None | 1.48A | 3kp2B-5mdnA:undetectable | 3kp2B-5mdnA:11.30 | |||
| 3KVR_A_URFA2001_1 (URIDINEPHOSPHORYLASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 10 | THR A 599GLY A 411LEU A 597LEU A 412ILE A 641 | None | 1.21A | 3kvrA-5mdnA:undetectable | 3kvrA-5mdnA:17.26 | |||
| 3KVR_B_URFB2011_1 (URIDINEPHOSPHORYLASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 10 | THR A 599GLY A 411LEU A 597LEU A 412ILE A 641 | None | 1.24A | 3kvrB-5mdnA:undetectable | 3kvrB-5mdnA:17.26 | |||
| 3L8L_A_DVAA6_0 (GRAMICIDIN D) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | ALA A 274VAL A 270TRP A 237 | None | 0.76A | 3l8lA-5mdnA:undetectable3l8lB-5mdnA:undetectable | 3l8lA-5mdnA:1.803l8lB-5mdnA:2.10 | |||
| 3L8L_C_DVAC6_0 (GRAMICIDIN D) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | ALA A 274VAL A 270TRP A 237 | None | 0.85A | 3l8lC-5mdnA:undetectable3l8lD-5mdnA:undetectable | 3l8lC-5mdnA:1.803l8lD-5mdnA:2.10 | |||
| 3L8L_D_DVAD8_0 (GRAMICIDIN D) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | VAL A 133VAL A 150TRP A 152 | None | 0.85A | 3l8lC-5mdnA:undetectable3l8lD-5mdnA:undetectable | 3l8lC-5mdnA:1.803l8lD-5mdnA:2.10 | |||
| 3M6V_A_SAMA465_0 (RRNA METHYLASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | GLY A 23VAL A 270ASP A 254ASP A 225PRO A 224 | None | 0.95A | 3m6vA-5mdnA:undetectable | 3m6vA-5mdnA:21.46 | |||
| 3NBQ_A_URFA400_1 (URIDINEPHOSPHORYLASE 1) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 9 | THR A 599GLY A 411LEU A 597LEU A 412ILE A 641 | None | 1.20A | 3nbqA-5mdnA:undetectable | 3nbqA-5mdnA:17.98 | |||
| 3NBQ_D_URFD400_1 (URIDINEPHOSPHORYLASE 1) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 9 | THR A 599GLY A 411LEU A 597LEU A 412ILE A 641 | None | 1.24A | 3nbqD-5mdnA:undetectable | 3nbqD-5mdnA:17.98 | |||
| 3NVK_I_SAMI228_0 (FIBRILLARIN-LIKERRNA/TRNA2'-O-METHYLTRANSFERASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | ALA A 344THR A 340ILE A 281ALA A 366VAL A 276 | None | 1.11A | 3nvkI-5mdnA:undetectable | 3nvkI-5mdnA:14.71 | |||
| 3OGP_A_017A200_2 (FIV PROTEASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 10 | LEU A 351ALA A 506VAL A 357VAL A 365LEU A 354 | None | 1.15A | 3ogpB-5mdnA:undetectable | 3ogpB-5mdnA:8.86 | |||
| 3QXY_B_SAMB6735_0 (N-LYSINEMETHYLTRANSFERASESETD6TRANSCRIPTION FACTORP65) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 11 | VAL A 534ALA A 531TYR A 439ALA A 523TYR A 517 | None | 1.27A | 3qxyB-5mdnA:undetectable3qxyQ-5mdnA:undetectable | 3qxyB-5mdnA:20.863qxyQ-5mdnA:2.52 | |||
| 3RC0_A_SAMA484_0 (N-LYSINEMETHYLTRANSFERASESETD6) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 11 | VAL A 534ALA A 531TYR A 439ALA A 523TYR A 517 | None | 1.24A | 3rc0A-5mdnA:undetectable | 3rc0A-5mdnA:20.86 | |||
| 3RUK_B_AERB601_1 (STEROID17-ALPHA-HYDROXYLASE/17,20 LYASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | ALA A 54ILE A 80ALA A 44VAL A 69VAL A 70 | None | 1.06A | 3rukB-5mdnA:undetectable | 3rukB-5mdnA:21.94 | |||
| 3UB9_A_NHYA301_1 (CHEMORECEPTOR TLPB) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 10 | VAL A 418ASP A 590TYR A 593TYR A 605LYS A 603 | None | 1.36A | 3ub9A-5mdnA:0.0 | 3ub9A-5mdnA:11.70 | |||
| 3UB9_B_NHYB301_1 (CHEMORECEPTOR TLPB) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 10 | VAL A 418ASP A 590TYR A 593TYR A 605LYS A 603 | None | 1.36A | 3ub9B-5mdnA:0.0 | 3ub9B-5mdnA:11.70 | |||
| 3UVV_B_9CRB501_1 (RETINOIC ACIDRECEPTOR RXR-ALPHA) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | ILE A 752ALA A 754ALA A 755ALA A 630LEU A 762 | None | 1.22A | 3uvvB-5mdnA:undetectable | 3uvvB-5mdnA:15.56 | |||
| 3ZQ8_D_DVAD8_0 (VAL-GRAMICIDIN A) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | TRP A 268VAL A 276TRP A 237 | None | 1.24A | 3zq8C-5mdnA:undetectable3zq8D-5mdnA:undetectable | 3zq8C-5mdnA:1.803zq8D-5mdnA:1.80 | |||
| 4A6E_A_SAMA1349_1 (HYDROXYINDOLEO-METHYLTRANSFERASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | TYR A 558ASP A 562ASP A 590 | None | 0.81A | 4a6eA-5mdnA:undetectable | 4a6eA-5mdnA:18.53 | |||
| 4AX8_A_SAMA1474_1 (WBDD) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 6 | ARG A 305ASP A 671GLU A 318LEU A 310 | None | 1.27A | 4ax8A-5mdnA:undetectable | 4ax8A-5mdnA:22.28 | |||
| 4KCN_A_MTLA804_0 (NITRIC OXIDESYNTHASE, BRAIN) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 6 | GLU A 171ASP A 336ASP A 335ARG A 308 | MG A 803 (-4.3A)NoneNoneNone | 1.37A | 4kcnA-5mdnA:undetectable | 4kcnA-5mdnA:19.11 | |||
| 4KCN_A_MTLA804_0 (NITRIC OXIDESYNTHASE, BRAIN) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 6 | GLU A 393ARG A 392ASP A 112ARG A 96 | None | 1.02A | 4kcnA-5mdnA:undetectable | 4kcnA-5mdnA:19.11 | |||
| 4KCN_B_MTLB805_0 (NITRIC OXIDESYNTHASE, BRAIN) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 6 | GLU A 171ASP A 336ASP A 335ARG A 308 | MG A 803 (-4.3A)NoneNoneNone | 1.39A | 4kcnB-5mdnA:undetectable | 4kcnB-5mdnA:19.11 | |||
| 4KCN_B_MTLB805_0 (NITRIC OXIDESYNTHASE, BRAIN) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 6 | GLU A 393ARG A 392ASP A 112ARG A 96 | None | 1.05A | 4kcnB-5mdnA:undetectable | 4kcnB-5mdnA:19.11 | |||
| 4NKV_A_AERA601_1 (STEROID17-ALPHA-HYDROXYLASE/17,20 LYASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | ALA A 54ILE A 80ALA A 44VAL A 69VAL A 70 | None | 1.08A | 4nkvA-5mdnA:undetectable | 4nkvA-5mdnA:21.94 | |||
| 4NKV_C_AERC601_1 (STEROID17-ALPHA-HYDROXYLASE/17,20 LYASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | ALA A 54ILE A 80ALA A 44VAL A 69VAL A 70 | None | 1.06A | 4nkvC-5mdnA:undetectable | 4nkvC-5mdnA:21.94 | |||
| 4NKV_D_AERD601_1 (STEROID17-ALPHA-HYDROXYLASE/17,20 LYASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | ALA A 54ILE A 80ALA A 44VAL A 69VAL A 70 | None | 1.07A | 4nkvD-5mdnA:undetectable | 4nkvD-5mdnA:21.94 | |||
| 4P6V_E_RBFE201_1 (NA(+)-TRANSLOCATINGNADH-QUINONEREDUCTASE SUBUNIT BNA(+)-TRANSLOCATINGNADH-QUINONEREDUCTASE SUBUNIT E) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 5 | HIS A 459VAL A 530GLU A 532VAL A 457 | None | 1.43A | 4p6vB-5mdnA:undetectable4p6vE-5mdnA:undetectable | 4p6vB-5mdnA:18.624p6vE-5mdnA:16.06 | |||
| 4XR4_B_AG2B511_1 (HOMOSPERMIDINESYNTHASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 3 / 3 | VAL A 105PHE A 42ARG A 96 | None | 0.92A | 4xr4B-5mdnA:undetectable | 4xr4B-5mdnA:22.46 | |||
| 5J2T_C_VLBC503_2 (TUBULIN ALPHA-1BCHAIN) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 6 / 12 | LEU A 608VAL A 638ILE A 758ALA A 755GLY A 607ILE A 614 | None | 1.28A | 5j2tC-5mdnA:undetectable | 5j2tC-5mdnA:21.38 | |||
| 5O96_F_SAMF501_0 (RIBOSOMAL RNA SMALLSUBUNITMETHYLTRANSFERASE E) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 10 | LEU A 6PRO A 5GLY A 272LEU A 362ALA A 274 | None | 1.13A | 5o96E-5mdnA:undetectable5o96F-5mdnA:undetectable | 5o96E-5mdnA:14.255o96F-5mdnA:14.25 | |||
| 5OM3_B_DXTB501_1 (ALPHA-1-ANTICHYMOTRYPSIN) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 6 | LEU A 564SER A 563PHE A 421ASP A 420 | None | 1.18A | 5om3A-5mdnA:undetectable5om3B-5mdnA:undetectable | 5om3A-5mdnA:6.005om3B-5mdnA:4.55 | |||
| 5YBB_A_SAMA601_1 (TYPE IRESTRICTION-MODIFICATION SYSTEMMETHYLTRANSFERASESUBUNIT) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 4 / 5 | THR A 340ASP A 236GLU A 171ASN A 174 | None MG A 802 ( 3.7A) MG A 803 (-4.3A)None | 1.25A | 5ybbA-5mdnA:2.9 | 5ybbA-5mdnA:22.33 | |||
| 6BXL_B_SAMB401_0 (2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINESYNTHASE) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 12 | GLY A 723VAL A 735ARG A 728VAL A 719ASP A 742 | None | 1.29A | 6bxlB-5mdnA:undetectable | 6bxlB-5mdnA:18.81 | |||
| 6CZM_C_HISC402_0 (ATPPHOSPHORIBOSYLTRANSFERASE CATALYTICSUBUNIT) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 9 | VAL A 228LEU A 293GLY A 342LEU A 343VAL A 337 | None | 1.31A | 6czmB-5mdnA:undetectable6czmC-5mdnA:undetectable | 6czmB-5mdnA:19.706czmC-5mdnA:19.70 | |||
| 6CZM_E_HISE402_0 (ATPPHOSPHORIBOSYLTRANSFERASE CATALYTICSUBUNIT) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 9 | VAL A 228LEU A 293GLY A 342LEU A 343VAL A 337 | None | 1.31A | 6czmD-5mdnA:2.96czmE-5mdnA:undetectable | 6czmD-5mdnA:19.706czmE-5mdnA:19.70 | |||
| 6CZM_F_HISF402_0 (ATPPHOSPHORIBOSYLTRANSFERASE CATALYTICSUBUNIT) |
5mdn | DNA POLYMERASE (Pyrobaculumcalidifontis) | 5 / 10 | VAL A 228LEU A 293GLY A 342LEU A 343VAL A 337 | None | 1.29A | 6czmE-5mdnA:2.46czmF-5mdnA:4.8 | 6czmE-5mdnA:19.706czmF-5mdnA:19.70 |