SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5mkg'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UOB_A_PNNA1311_1
(DEACETOXYCEPHALOSPOR
IN C SYNTHETASE)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		3 / 3 ARG B  53
ARG B  43
ILE B  58
 C2E  B 304 (-3.7A)
C2E  B 304 (-2.6A)
C2E  B 304 ( 4.1A)
 0.75A 1uobA-5mkgB:
undetectable		 1uobA-5mkgB:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QX3_A_EVPA1_1
(DNA TOPOISOMERASE
2-BETA)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 5 GLY B  30
ARG B 225
GLN B  25
MET B 245
 None
None
C2E  B 304 (-2.9A)
None
 1.21A 3qx3A-5mkgB:
undetectable		 3qx3A-5mkgB:
14.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QX3_D_EVPD1_1
(DNA TOPOISOMERASE
2-BETA)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 5 GLY B  30
ARG B 225
GLN B  25
MET B 245
 None
None
C2E  B 304 (-2.9A)
None
 1.16A 3qx3B-5mkgB:
undetectable		 3qx3B-5mkgB:
14.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UFN_A_ROCA402_1
(HIV-1 PROTEASE)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 5 ARG B 225
LEU B 236
VAL B 219
ASP B 226
 None
 0.77A 3ufnA-5mkgB:
undetectable
3ufnB-5mkgB:
undetectable		 3ufnA-5mkgB:
15.92
3ufnB-5mkgB:
15.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W67_A_VIVA301_0
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		5 / 11 LEU B 136
ILE B 203
VAL B 177
PHE B 147
VAL B 128
 None
 1.12A 3w67A-5mkgB:
2.9		 3w67A-5mkgB:
23.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W67_C_VIVC301_0
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		5 / 12 ILE B  67
LEU B 136
SER B 139
LEU B 146
PHE B 175
 C2E  B 304 ( 4.9A)
None
None
None
None
 1.18A 3w67C-5mkgB:
undetectable		 3w67C-5mkgB:
23.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FEX_B_KANB301_1
(AMINOGLYCOSIDE
3'-PHOSPHOTRANSFERAS
E APHA1-IAB)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 7 ASP B 160
ASP B  55
GLU B 135
GLU B 217
 CA  B 302 (-2.5A)
C2E  B 304 (-3.8A)
CA  B 301 (-3.1A)
CA  B 303 (-2.4A)
 1.12A 4fexB-5mkgB:
undetectable		 4fexB-5mkgB:
21.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XV2_A_P06A801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 4 GLY B  30
LEU B 200
PHE B 186
ILE B 182
 None
 0.83A 4xv2A-5mkgB:
undetectable		 4xv2A-5mkgB:
21.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZN7_B_DESB600_1
(ESTROGEN RECEPTOR)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		5 / 11 MET B  75
LEU B 116
LEU B 150
LEU B 153
LEU B 109
 None
 1.35A 4zn7B-5mkgB:
undetectable		 4zn7B-5mkgB:
24.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DJZ_C_GMJC301_1
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 6 LEU B 127
ASP B 160
GLN B 184
GLU B 130
 None
CA  B 302 (-2.5A)
C2E  B 304 (-3.1A)
CA  B 302 (-3.3A)
 1.38A 6djzC-5mkgB:
undetectable		 6djzC-5mkgB:
21.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6G31_D_ZOLD401_0
(GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 7 LEU B  41
ASP B  55
ARG B  43
GLN B 184
 C2E  B 304 ( 3.5A)
C2E  B 304 (-3.8A)
C2E  B 304 (-2.6A)
C2E  B 304 (-3.1A)
 1.14A 6g31D-5mkgB:
undetectable		 6g31D-5mkgB:
17.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6G31_J_ZOLJ401_0
(GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE)		 5mkg DIGUANYLATE
PHOSPHODIESTERASE
(Pseudomonas
aeruginosa) 		4 / 6 LEU B  41
ASP B  55
ARG B  43
GLN B 184
 C2E  B 304 ( 3.5A)
C2E  B 304 (-3.8A)
C2E  B 304 (-2.6A)
C2E  B 304 (-3.1A)
 1.22A 6g31J-5mkgB:
undetectable		 6g31J-5mkgB:
17.73