SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ms3'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AV2_A_DVAA6_0
(GRAMICIDIN A)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		3 / 3 ALA A  32
VAL A  45
TRP A  29
 None
 0.93A 1av2A-5ms3A:
undetectable
1av2B-5ms3A:
undetectable		 1av2A-5ms3A:
undetectable
1av2B-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BCU_H_PRLH280_0
(ALPHA-THROMBIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		5 / 9 ASP A 189
SER A 195
TRP A 215
GLY A 216
GLY A 226
 None
 0.28A 1bcuH-5ms3A:
17.8		 1bcuH-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DWC_H_MITH1_1
(ALPHA-THROMBIN
(LARGE SUBUNIT))		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		5 / 9 HIS A  57
ASP A 189
SER A 195
TRP A 215
GLY A 226
 None
 0.45A 1dwcH-5ms3A:
33.2		 1dwcH-5ms3A:
17.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ESW_A_ACRA652_1
(AMYLOMALTASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 6 GLY A 221
ASP A 189
GLY A 216
SER A 146
 None
 0.82A 1eswA-5ms3A:
undetectable		 1eswA-5ms3A:
8.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ETR_H_MITH1_1
(EPSILON-THROMBIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		6 / 12 HIS A  57
ASP A 189
SER A 195
TRP A 215
GLY A 216
GLY A 226
 None
 0.58A 1etrH-5ms3A:
32.9		 1etrH-5ms3A:
15.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1F5L_A_AMRA301_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		5 / 8 ASP A 189
GLN A 192
SER A 195
GLY A 216
GLY A 226
 None
 0.61A 1f5lA-5ms3A:
33.9		 1f5lA-5ms3A:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SS4_A_ACTA411_0
(GLYOXALASE FAMILY
PROTEIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 5 VAL A 138
THR A 137
GLN A  27
ILE A 121
 None
 1.28A 1ss4A-5ms3A:
undetectable		 1ss4A-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TKQ_B_DVAB6_0
(GRAMICIDIN A)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		3 / 3 ALA A  32
VAL A  45
TRP A  29
 None
 0.91A 1tkqB-5ms3A:
undetectable		 1tkqB-5ms3A:
undetectable
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1TNL_A_TPAA900_1
(TRYPSIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 6 ASP A 189
SER A 195
GLY A 216
GLY A 226
 None
 0.35A 1tnlA-5ms3A:
38.2		 1tnlA-5ms3A:
33.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OTV_A_NCAA1301_0
(CATIONIC TRYPSIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 6 ASP A 189
SER A 195
GLY A 216
GLY A 226
 None
 0.24A 2otvA-5ms3A:
38.3		 2otvA-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OXT_D_SAMD300_0
(NUCLEOSIDE-2'-O-METH
YLTRANSFERASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		6 / 12 GLY A 142
GLY A  44
GLY A 196
GLY A 193
THR A  54
LEU A  53
 None
 1.41A 2oxtD-5ms3A:
undetectable		 2oxtD-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2P16_A_GG2A298_1
(COAGULATION FACTOR X
(EC 3.4.21.6)
(STUART FACTOR)
(STUART-PROWER
FACTOR))		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		6 / 12 ASP A 189
SER A 195
TRP A 215
GLY A 216
GLY A 226
TYR A 228
 None
 0.29A 2p16A-5ms3A:
34.3		 2p16A-5ms3A:
21.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2R2V_D_ACTD37_0
(GCN4 LEUCINE ZIPPER)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		3 / 3 LYS A  62
ARG A 109
VAL A  85
 None
 0.85A 2r2vC-5ms3A:
undetectable
2r2vD-5ms3A:
undetectable		 2r2vC-5ms3A:
undetectable
2r2vD-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W26_A_RIVA1001_1
(ACTIVATED FACTOR XA
HEAVY CHAIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		6 / 12 ASP A 189
SER A 195
TRP A 215
GLY A 216
GLY A 226
TYR A 228
 None
 0.33A 2w26A-5ms3A:
17.0		 2w26A-5ms3A:
21.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GY3_A_PNTA246_0
(CATIONIC TRYPSIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		7 / 11 HIS A  57
GLN A 175
ASP A 189
SER A 195
TRP A 215
GLY A 216
GLY A 226
 None
 0.62A 3gy3A-5ms3A:
38.3		 3gy3A-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3I5U_B_SAMB401_0
(O-METHYLTRANSFERASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		5 / 12 LEU A  73
GLY A 193
GLY A 142
SER A 214
ALA A  32
 None
 1.15A 3i5uB-5ms3A:
undetectable		 3i5uB-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L2V_A_RLTA397_1
(INTEGRASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 7 ASP A  77
GLN A  30
PRO A  24
GLN A  23
 CA  A3001 (-3.2A)
None
None
None
 0.99A 3l2vA-5ms3A:
2.1		 3l2vA-5ms3A:
12.66
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3RXF_A_4APA9_1
(CATIONIC TRYPSIN)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 6 SER A 195
TRP A 215
GLY A 216
GLY A 226
 None
 0.25A 3rxfA-5ms3A:
15.4		 3rxfA-5ms3A:
34.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5N_C_PXLC300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 8 GLY A 226
GLY A 184
VAL A 181
VAL A 138
 None
 0.72A 4c5nC-5ms3A:
undetectable		 4c5nC-5ms3A:
15.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DV1_A_SRYA1601_1
(16S RRNA
RIBOSOMAL PROTEIN
S12)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		3 / 3 LYS A 166
LYS A 167
PRO A 164
 None
 1.14A 4dv1L-5ms3A:
undetectable		 4dv1L-5ms3A:
22.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FU8_A_ACTA302_0
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 5 HIS A  57
GLN A 192
GLY A 193
SER A 195
 None
 0.68A 4fu8A-5ms3A:
33.9		 4fu8A-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J5J_B_478B401_2
(PROTEASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		5 / 10 ILE A  83
GLY A  48
ILE A 242
VAL A  85
VAL A  65
 None
 1.00A 4j5jB-5ms3A:
undetectable		 4j5jB-5ms3A:
16.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZE0_A_VORA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		5 / 9 ILE A 121
GLY A 211
THR A 229
LEU A 103
LEU A 105
 None
 1.39A 4ze0A-5ms3A:
undetectable		 4ze0A-5ms3A:
10.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EIW_C_SAMC4000_0
(NS5
METHYLTRANSFERASE)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		6 / 12 GLY A 142
GLY A  44
GLY A 196
GLY A 193
THR A  54
VAL A  52
 None
 1.25A 5eiwC-5ms3A:
undetectable		 5eiwC-5ms3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DWJ_B_GLYB710_0
(DEOXYNUCLEOSIDE
TRIPHOSPHATE
TRIPHOSPHOHYDROLASE
SAMHD1)		 5ms3 KALLIKREIN-8
(Homo
sapiens) 		4 / 5 ARG A 233
GLY A 179
ASN A 230
ASP A 178
 None
 1.27A 6dwjB-5ms3A:
undetectable
6dwjD-5ms3A:
undetectable		 6dwjB-5ms3A:
undetectable
6dwjD-5ms3A:
undetectable