SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5msc'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AV2_C_DVAC6_0
(GRAMICIDIN A)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 ALA A 102
VAL A  97
TRP A  94
None
0.79A 1av2C-5mscA:
undetectable
1av2D-5mscA:
undetectable
1av2C-5mscA:
1.50
1av2D-5mscA:
1.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EII_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN II)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 12 THR A 130
ALA A 134
ARG A 228
LEU A 189
LEU A 224
None
1.16A 1eiiA-5mscA:
undetectable
1eiiA-5mscA:
7.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FO4_A_SALA3005_1
(XANTHINE
DEHYDROGENASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 ARG A 304
THR A 142
VAL A 141
LEU A 249
ALA A 272
None
1.45A 1fo4A-5mscA:
undetectable
1fo4A-5mscA:
23.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HK3_A_T44A3001_1
(SERUM ALBUMIN)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 11 TYR A 128
PRO A 163
LEU A 158
LEU A 145
ALA A 167
None
1.25A 1hk3A-5mscA:
3.1
1hk3A-5mscA:
20.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1J8U_A_H4BA429_1
(PHENYLALANINE-4-HYDR
OXYLASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 7 VAL A 444
LEU A 463
LEU A 464
PHE A 490
ALA A 467
None
1.23A 1j8uA-5mscA:
undetectable
1j8uA-5mscA:
14.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1LQT_A_ACTA1871_0
(FPRA)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 7 PRO A 297
ALA A 147
PHE A 123
SER A 323
None
1.25A 1lqtA-5mscA:
undetectable
1lqtA-5mscA:
18.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1LQU_A_ACTA1428_0
(FPRA)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 7 PRO A 297
ALA A 147
PHE A 123
SER A 323
None
1.24A 1lquA-5mscA:
2.2
1lquA-5mscA:
18.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q13_A_TESA501_1
(PROSTAGLANDIN-E2
9-REDUCTASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 6 TYR A 441
GLU A 499
PRO A 459
VAL A 497
None
1.27A 1q13A-5mscA:
undetectable
1q13A-5mscA:
14.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1W5U_C_DVAC6_0
(GRAMICIDIN D)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 ALA A 102
VAL A  97
TRP A  94
None
0.78A 1w5uC-5mscA:
undetectable
1w5uD-5mscA:
undetectable
1w5uC-5mscA:
1.50
1w5uD-5mscA:
1.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2E1Q_C_SALC4006_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 6 ARG A 304
THR A 142
VAL A 141
LEU A 249
ALA A 272
None
1.48A 2e1qC-5mscA:
undetectable
2e1qC-5mscA:
23.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2E1Q_D_SALD5006_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 5 ARG A  64
PHE A  85
LEU A 328
ALA A 321
None
1.32A 2e1qD-5mscA:
undetectable
2e1qD-5mscA:
23.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2J2P_A_SC2A1290_1
(FICOLIN-2)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 5 ASP A 193
SER A 125
LEU A 120
GLY A 122
None
1.16A 2j2pA-5mscA:
undetectable
2j2pB-5mscA:
undetectable
2j2pA-5mscA:
11.25
2j2pB-5mscA:
11.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V7B_A_BEZA1529_0
(BENZOATE-COENZYME A
LIGASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 ALA A 134
ALA A 102
GLY A 231
GLY A  98
HIS A 137
None
1.35A 2v7bA-5mscA:
34.1
2v7bA-5mscA:
20.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V7B_B_BEZB1529_0
(BENZOATE-COENZYME A
LIGASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 ALA A 134
ALA A 102
GLY A 231
GLY A  98
HIS A 137
None
1.34A 2v7bB-5mscA:
34.3
2v7bB-5mscA:
20.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AX7_B_SALB1336_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 ARG A 304
THR A 142
VAL A 141
LEU A 249
ALA A 272
None
1.45A 3ax7B-5mscA:
undetectable
3ax7B-5mscA:
23.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E22_D_LOCD700_2
(TUBULIN BETA-2B
CHAIN)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 11 CYH A 179
LEU A 158
LEU A 121
ALA A 149
VAL A 151
None
1.26A 3e22D-5mscA:
2.2
3e22D-5mscA:
16.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GN8_A_DEXA247_2
(GLUCOCORTICOID
RECEPTOR 2)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 MET A 298
MET A 325
PHE A 319
None
1.30A 3gn8A-5mscA:
undetectable
3gn8A-5mscA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IJD_B_C2FB314_0
(UNCHARACTERIZED
PROTEIN)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 12 TYR A 318
LEU A 293
VAL A 310
GLY A 309
ILE A 126
None
1.16A 3ijdB-5mscA:
undetectable
3ijdB-5mscA:
13.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JB2_A_SAMA1101_1
(STRUCTURAL PROTEIN
VP3)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 GLU A 187
ASP A 116
ASP A 107
None
0.76A 3jb2A-5mscA:
2.1
3jb2A-5mscA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_B_TFPB202_1
(PROTEIN S100-A4)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 GLU A 407
LEU A 410
ASP A 411
None
0.35A 3ko0A-5mscA:
undetectable
3ko0A-5mscA:
6.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_S_TFPS202_2
(PROTEIN S100-A4)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 GLU A 407
LEU A 410
ASP A 411
None
0.37A 3ko0T-5mscA:
undetectable
3ko0T-5mscA:
6.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_A_DVAA6_0
(GRAMICIDIN D)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 ALA A 102
VAL A  97
TRP A  94
None
0.84A 3l8lA-5mscA:
undetectable
3l8lB-5mscA:
undetectable
3l8lA-5mscA:
1.50
3l8lB-5mscA:
1.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_C_DVAC6_0
(GRAMICIDIN D)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 ALA A 102
VAL A  97
TRP A  94
None
0.86A 3l8lC-5mscA:
undetectable
3l8lD-5mscA:
undetectable
3l8lC-5mscA:
1.50
3l8lD-5mscA:
1.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N23_A_OBNA1_1
(SODIUM/POTASSIUM-TRA
NSPORTING ATPASE
SUBUNIT ALPHA-1)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 11 GLN A  11
VAL A  24
ALA A  27
THR A 338
ILE A 291
None
1.21A 3n23A-5mscA:
3.3
3n23A-5mscA:
22.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OWX_A_XRAA233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 TRP A 276
GLY A 315
TYR A  55
GLU A 339
ILE A 291
None
1.39A 3owxA-5mscA:
3.2
3owxA-5mscA:
11.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OWX_B_XRAB233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 11 TRP A 276
GLY A 315
TYR A  55
GLU A 339
ILE A 291
None
1.38A 3owxA-5mscA:
3.2
3owxB-5mscA:
3.2
3owxA-5mscA:
11.62
3owxB-5mscA:
11.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UNA_A_SALA1340_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 ARG A 304
THR A 142
VAL A 141
LEU A 249
ALA A 272
None
1.47A 3unaA-5mscA:
undetectable
3unaA-5mscA:
23.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UNA_B_SALB1340_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 ARG A 304
THR A 142
VAL A 141
LEU A 249
ALA A 272
None
1.49A 3unaB-5mscA:
undetectable
3unaB-5mscA:
23.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UNC_A_SALA1338_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 9 ARG A 304
THR A 142
VAL A 141
LEU A 249
ALA A 272
None
1.48A 3uncA-5mscA:
undetectable
3uncA-5mscA:
23.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UNI_A_SALA1344_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 7 ARG A 304
THR A 142
VAL A 141
LEU A 249
ALA A 272
None
1.49A 3uniA-5mscA:
undetectable
3uniA-5mscA:
23.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V4T_A_ACTA503_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 ARG A 209
GLU A 222
THR A 223
None
0.89A 3v4tA-5mscA:
undetectable
3v4tA-5mscA:
17.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WNW_B_RTZB602_2
(CYTOCHROME P450 2D6)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 GLU A  99
ILE A 126
ALA A 134
None
0.65A 4wnwB-5mscA:
undetectable
4wnwB-5mscA:
18.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FEP_A_SAMA407_0
([FEFE] HYDROGENASE
MATURASE SUBUNIT
HYDE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 12 GLN A 287
LEU A  30
ARG A  28
ARG A  58
ILE A  14
None
1.42A 5fepA-5mscA:
undetectable
5fepA-5mscA:
15.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FES_A_SAMA408_0
([FEFE] HYDROGENASE
MATURASE SUBUNIT
HYDE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 12 GLN A 287
LEU A  30
ARG A  28
ARG A  58
ILE A  14
None
1.43A 5fesA-5mscA:
undetectable
5fesA-5mscA:
15.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FSA_A_X2NA590_1
(CYP51 VARIANT1)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 12 ALA A 140
LEU A 307
PHE A 319
GLY A  62
LEU A  93
None
1.22A 5fsaA-5mscA:
undetectable
5fsaA-5mscA:
16.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IKT_A_TLFA601_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 LEU A 465
TYR A 418
SER A 420
None
AMP  A1201 (-4.9A)
None
0.73A 5iktA-5mscA:
undetectable
5iktA-5mscA:
17.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5K50_A_ACTA1403_0
(L-THREONINE
3-DEHYDROGENASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 5 SER A 362
VAL A 363
GLY A 365
ALA A 366
None
1.03A 5k50A-5mscA:
3.9
5k50A-5mscA:
14.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KMD_C_6UBC1304_1
(ION TRANSPORT
PROTEIN)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 5 ILE A 301
LEU A 311
GLY A 309
PHE A 308
None
0.88A 5kmdC-5mscA:
undetectable
5kmdD-5mscA:
2.4
5kmdC-5mscA:
13.48
5kmdD-5mscA:
13.48
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5MSD_A_BEZA1202_0
(CARBOXYLIC ACID
REDUCTASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 5 HIS A 300
ILE A 301
PHE A 341
SER A 395
ALA A 425
AMP  A1201 (-4.1A)
None
None
None
None
0.55A 5msdA-5mscA:
59.0
5msdA-5mscA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UTU_H_ADNH503_2
(ADENOSYLHOMOCYSTEINA
SE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 5 THR A 261
GLU A 160
THR A 161
LEU A 145
None
1.30A 5utuH-5mscA:
undetectable
5utuH-5mscA:
18.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5V5Z_A_1YNA602_2
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
3 / 3 GLY A 264
THR A 124
PRO A 144
None
0.65A 5v5zA-5mscA:
undetectable
5v5zA-5mscA:
18.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6GTQ_B_ACTB207_0
(DUF1778
DOMAIN-CONTAINING
PROTEIN
N-ACETYLTRANSFERASE)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 6 LEU A 389
THR A 338
GLY A 290
ARG A 313
None
1.36A 6gtqB-5mscA:
undetectable
6gtqD-5mscA:
undetectable
6gtqB-5mscA:
9.27
6gtqD-5mscA:
3.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6IBL_B_H98B501_0
(THIOREDOXIN 1,BETA-1
ADRENERGIC RECEPTOR)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
5 / 12 VAL A 393
VAL A 392
ASP A 495
ASN A 431
VAL A 427
None
None
AMP  A1201 (-2.7A)
None
None
1.12A 6iblB-5mscA:
undetectable
6iblB-5mscA:
16.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6MA7_A_TPFA602_0
(CYTOCHROME P450 3A4)
5msc CARBOXYLIC ACID
REDUCTASE

(Nocardia
iowensis)
4 / 7 SER A 256
ALA A 149
ILE A 155
ALA A 156
None
0.96A 6ma7A-5mscA:
undetectable
6ma7A-5mscA:
5.32