SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5n38'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FE2_A_LAXA700_1
(PROSTAGLANDIN
ENDOPEROXIDE H
SYNTHASE-1)
5n38 E3 UBIQUITIN-PROTEIN
LIGASE PARKIN,E3
UBIQUITIN-PROTEIN
LIGASE PARKIN

(Homo
sapiens)
5 / 10 VAL A  56
VAL A  36
VAL A   5
ILE A   2
LEU A  26
None
1.14A 1fe2A-5n38A:
undetectable
1fe2A-5n38A:
18.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z97_A_CAMA422_0
(CYTOCHROME P450-CAM)
5n38 E3 UBIQUITIN-PROTEIN
LIGASE PARKIN,E3
UBIQUITIN-PROTEIN
LIGASE PARKIN

(Homo
sapiens)
4 / 6 THR A  21
VAL A  29
VAL A  67
VAL A   5
None
0.95A 2z97A-5n38A:
undetectable
2z97A-5n38A:
18.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PM5_A_CE3A301_2
(BETA-LACTAMASE
CTX-M-14)
5n38 E3 UBIQUITIN-PROTEIN
LIGASE PARKIN,E3
UBIQUITIN-PROTEIN
LIGASE PARKIN

(Homo
sapiens)
3 / 3 CYH A 238
PRO A 247
ASP A 262
ZN  A2503 ( 2.3A)
None
None
0.99A 4pm5A-5n38A:
undetectable
4pm5A-5n38A:
18.87