SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5n40'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YAJ_G_BEZG3385_0
(CES1 PROTEIN)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
3 / 3 SER A2455
VAL A2530
LEU A2535
None
0.61A 1yajG-5n40A:
undetectable
1yajG-5n40A:
22.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YKI_B_NFZB2219_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 8 TYR A2789
PHE A2713
ASN A2788
GLY A2787
None
1.09A 1ykiA-5n40A:
undetectable
1ykiB-5n40A:
undetectable
1ykiA-5n40A:
19.77
1ykiB-5n40A:
19.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YKI_C_NFZC3219_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 8 TYR A2789
PHE A2713
ASN A2788
GLY A2787
None
1.08A 1ykiC-5n40A:
undetectable
1ykiD-5n40A:
undetectable
1ykiC-5n40A:
19.77
1ykiD-5n40A:
19.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YKI_D_NFZD4219_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 8 TYR A2789
PHE A2713
ASN A2788
GLY A2787
None
1.07A 1ykiC-5n40A:
undetectable
1ykiD-5n40A:
undetectable
1ykiC-5n40A:
19.77
1ykiD-5n40A:
19.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XNR_A_ACTA1001_0
(NUCLEAR
POLYADENYLATED
RNA-BINDING PROTEIN
3)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
3 / 3 SER A2756
ARG A2755
GLN A2715
None
0.98A 2xnrA-5n40A:
undetectable
2xnrA-5n40A:
11.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4D33_A_ACTA860_0
(NITRIC OXIDE
SYNTHASE,
ENDOTHELIAL)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 5 GLY A2638
ILE A2637
VAL A2593
SER A2604
None
1.03A 4d33A-5n40A:
undetectable
4d33A-5n40A:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4D33_B_ACTB860_0
(NITRIC OXIDE
SYNTHASE,
ENDOTHELIAL)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 5 GLY A2638
ILE A2637
VAL A2593
SER A2604
None
1.05A 4d33B-5n40A:
undetectable
4d33B-5n40A:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4D39_B_ACTB860_0
(NITRIC OXIDE
SYNTHASE,
ENDOTHELIAL)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 6 GLY A2638
ILE A2637
VAL A2593
SER A2604
None
1.08A 4d39B-5n40A:
undetectable
4d39B-5n40A:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MM8_A_RFXA603_1
(TRANSPORTER)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
5 / 12 VAL A2528
ALA A2492
GLY A2444
GLY A2532
THR A2537
None
1.01A 4mm8A-5n40A:
undetectable
4mm8A-5n40A:
19.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QCK_A_ASDA404_1
(3-KETOSTEROID-9-ALPH
A-MONOOXYGENASE
OXYGENASE SUBUNIT)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
5 / 12 ASN A2583
VAL A2584
ALA A2547
ASN A2467
GLY A2498
None
1.26A 4qckA-5n40A:
undetectable
4qckA-5n40A:
22.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DV4_A_NMYA601_2
(CCR4-NOT
TRANSCRIPTION
COMPLEX SUBUNIT
6-LIKE)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
3 / 3 GLU A2705
TRP A2748
ASN A2740
None
1.00A 5dv4A-5n40A:
undetectable
5dv4A-5n40A:
20.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ECO_A_LEUA602_0
(JASMONIC ACID-AMIDO
SYNTHETASE JAR1)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 6 THR A2541
ALA A2524
THR A2523
VAL A2544
None
0.99A 5ecoA-5n40A:
undetectable
5ecoA-5n40A:
21.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6MVX_A_K4DA1304_0
(ION TRANSPORT
PROTEIN)
5n40 PUTATIVE INVASIN
(Yersinia
pseudotuberculos
is)
4 / 6 MET A2751
THR A2750
THR A2663
LEU A2680
None
1.14A 6mvxA-5n40A:
undetectable
6mvxB-5n40A:
undetectable
6mvxC-5n40A:
undetectable
6mvxA-5n40A:
21.41
6mvxB-5n40A:
21.41
6mvxC-5n40A:
21.41